Lintian Reports

Debian Med Packaging Team

At the time of the last Lintian run, the following possible problems were found in packages maintained by Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>, listed by source package. See also the full report, including info, experimental and overridden tags. Also see their QA overview.

abacas (1.3.1-4)

abacas

abyss (2.0.2-3)

abyss

adapterremoval (2.2.2-1)

adapterremoval

adun.app (0.81-10)

adun.app (0.81-10+b2; main)

adun.app-dbg (0.81-10+b2; main)

aegean (0.15.2+dfsg-1)

aegean-dbg

aeskulap (0.2.2b1+git20161206-2)

aeskulap (0.2.2b1+git20161206-2+b1; main)

aevol (5.0-1)

aevol

alien-hunter (1.7-6)

alien-hunter

alter-sequence-alignment (1.3.3+dfsg-1)

amap-align (2.2-6)

ampliconnoise (1.29-7)

ampliconnoise-dbgsym

andi (0.11-1)

arb (6.0.6-2; non-free)

arb-common

arden (1.0-3)

arden

ariba (2.10.3+ds-1)

art-nextgen-simulation-tools (20160605+dfsg-2)

augustus (3.3+dfsg-2)

autodock-vina (1.1.2-4)

autodock-vina-dbgsym

autodocktools (1.5.7-2; non-free)

autodocktools

axe-demultiplexer (0.3.2+dfsg1-1)

axe-demultiplexer (0.3.2+dfsg1-1+b1; main)

baitfisher (1.0+dfsg-2)

baitfisher

baitfisher-dbgsym

ball (1.4.3~beta1-3)

ballview (1.4.3~beta1-3+b1; main)

libball1.4 (1.4.3~beta1-3+b1; main)

libballview1.4 (1.4.3~beta1-3+b1; main)

ball (1.4.3~beta1-4)

ballview

libball1.4

libball1.4-data

libball1.4-dev

libball1.4-doc

libballview1.4

libballview1.4-dev

python-ball

python-ballview

bambamc (0.0.50-1)

libbambamc0

barrnap (0.8+dfsg-2)

bcftools (1.6-3)

bcftools

beads (1.1.13+dfsg-2)

beads

beast-mcmc (1.8.4+dfsg.1-2)

beast-mcmc

libnucleotidelikelihoodcore0-dbgsym

bedops (2.4.26+dfsg-1)

bedops

bedops-dbgsym

bedtools (2.26.0+dfsg-5)

bedtools

bedtools-dbgsym

bedtools-test

bio-rainbow (2.0.4-1)

bio-rainbow (2.0.4-1+b1; main)

bio-tradis (1.3.3+dfsg-2)

biococoa (2.2.2-3)

libbiococoa2-dbgsym (2.2.2-3+b1; main)

biojava4-live (4.2.7+dfsg-2)

libbiojava4-java-doc

biomaj (1.2.3-12)

biomaj

biomaj3 (3.1.3-1)

python3-biomaj3

biomaj3-cli (3.1.7-1)

python3-biomaj3-cli

biomaj3-core (3.0.9-1)

biomaj3-daemon (3.0.12-1)

python3-biomaj3-daemon

biomaj3-download (3.0.13-1)

python3-biomaj3-download

biomaj3-process (3.0.8-1)

python3-biomaj3-process

biomaj3-user (3.0.6-1)

python3-biomaj3-user

biomaj3-zipkin (0.2.2-1)

bioperl (1.7.2-2)

bioperl

libbio-perl-perl

bioperl-run (1.7.2-2)

bioperl-run

libbio-perl-run-perl

biosquid (1.9g+cvs20050121-10)

blasr (5.3+0-1)

blasr (5.3+0-1+b1; main)

blimps (3.9-3; non-free)

blimps-utils

blimps-utils-dbgsym

libblimps3-dbgsym

bowtie (1.2.1.1+dfsg-1)

bowtie

bowtie-examples

bowtie2 (2.2.5-2)

bowtie2 (2.3.3.1-1)

bowtie2

bppphyview (0.5.1-1)

bppphyview-dbgsym

bppsuite (2.3.1-4)

bppsuite

bppsuite-dbgsym

brig (0.95+dfsg-1)

brig

cain (1.10+dfsg-2)

cain

camitk (4.0.4-2)

libcamitk4 (4.0.4-2+b2; main)

libqtpropertybrowser4 (4.0.4-2+b2; main)

canu (1.6+dfsg-2)

cassiopee (1.0.7-1)

libcassie1v5

cd-hit (4.6.8-1)

cd-hit

circlator (1.5.1-2)

circos (0.69.6+dfsg-1)

circos

clearcut (1.0.9-2)

clearcut-dbgsym

clonalorigin (1.0-2)

clonalorigin

clustalo (1.2.4-1)

clustalw (2.1+lgpl-5)

concavity (0.1+dfsg.1-1)

conservation-code (20110309.0-6)

conservation-code

crac (2.5.0+dfsg-2)

crac

ctsim (5.2.0-4)

ctsim-doc

cufflinks

cwltool (1.0.20170810192106-2)

cwltool

dawg (1.2-1)

debian-med (3.0.1)

med-all

med-bio

med-bio-dev

med-cloud

med-config

med-data

med-dental

med-epi

med-his

med-imaging

med-imaging-dev

med-laboratory

med-oncology

med-pharmacy

med-physics

med-practice

med-psychology

med-rehabilitation

med-statistics

med-tasks

med-tools

med-typesetting

deepnano (0.0+20160706-1)

deepnano

dicompyler (0.4.2.0-1)

dicompyler

discosnp (1.2.6-2)

discosnp

dnaclust (3-5)

dnaclust

dssp (3.0.0-2)

dwgsim (0.1.11-3)

ecopcr (0.5.0+dfsg-1)

ecopcr

edflib (1.12-2)

eigensoft (6.1.4+dfsg-1)

eigensoft (6.1.4+dfsg-1+b2; main)

embassy-domsearch (1:0.1.660-2)

embassy-domsearch

emboss (6.6.0+dfsg-6)

emboss

emboss-doc

emboss-lib

emboss-test

jemboss

emboss-explorer (2.2.0-9)

emboss-explorer

epigrass (2.4.7-2)

epigrass

falcon (1.8.8-1)

falcon

fast5 (0.6.4-2)

fast5

fastaq (3.16.0-1)

fastlink (4.1P-fix100+dfsg-1+b1; main)

fastlink-dbgsym (4.1P-fix100+dfsg-1+b1; main)

fastqtl (2.184+dfsg-5)

fasttree (2.1.10-1)

fastx-toolkit (0.0.14-5)

fastx-toolkit

fermi-lite (0.1-4)

ffindex (0.9.9.7-4)

ffindex

libffindex0

figtree (1.4.3+dfsg-3)

fis-gtm (6.3-002-3)

fis-gtm-6.3-002

fitgcp (0.0.20150429-1)

fitgcp

freebayes (1.1.0-1)

freebayes

freecontact (1.0.21-6)

freemedforms-project (0.9.4-2)

freemedforms-libs

fsm-lite (1.0-2)

fw4spl (11.0.4-2)

fw4spl (11.0.4-2+b2; main)

g2 (0.72-7)

libg20

gasic (0.0.r19-3)

gasic

gbrowse (2.56+dfsg-3)

gbrowse

gdcm (2.8.4-1)

genometools (1.5.10+ds-2)

gentle (1.9+cvs20100605+dfsg1-6)

gfapy (1.0.0+dfsg-2)

python3-gfapy

gff2aplot (2.0-9)

gff2aplot

gnumed-client (1.6.15+dfsg-1)

gnumed-client

gnumed-doc

gnumed-server (21.15-1)

gnumed-server

graphlan (1.1-3)

graphlan

grinder (0.5.4-4)

gubbins (2.3.1-1)

gwama (2.2.2+dfsg-1)

hhsuite (3.0~beta2+dfsg-3)

hhsuite

hilive (1.0-1)

hinge (0.5.0-2)

hinge

hisat2 (2.1.0-1)

hisat2

hmmer (3.1b2+dfsg-5)

hmmer

hmmer2 (2.3.2+dfsg-5)

libhmmer2-dev

htseq (0.5.4p3-2)

python-htseq-doc

htseq (0.6.1p1-4)

python-htseq-doc

htsjdk (2.8.1+dfsg-2)

libhtsjdk-java

htslib (1.6-2)

libhts-dev

hunspell-en-med (0.0.20080513-2)

hunspell-en-med

hyphy (2.2.7+dfsg-1)

hyphy-mpi (2.2.7+dfsg-1+b2; main)

hyphy-pt (2.2.7+dfsg-1+b2; main)

hyphygui (2.2.7+dfsg-1+b2; main)

idba (1.1.3-2)

idba

igraph (0.7.1-2.1)

insighttoolkit4 (4.12.2-dfsg1-1)

libinsighttoolkit4-dev

libinsighttoolkit4.12

invesalius (3.1.1-3)

invesalius

ipig (0.0.r5-2)

iqtree (1.5.5+dfsg-1)

iqtree

iva (1.0.8+ds-1)

iva

jebl2 (0.1+20140614-1)

jmodeltest (2.1.10+dfsg-5)

jmodeltest

khmer (2.1.2+dfsg-1)

khmer-common

khmer (2.1.2+dfsg-2)

khmer-common

kineticstools (0.6.1+20161222-1)

kineticstools

kissplice (2.4.0-p1-2)

kissplice

kmc (2.3+dfsg-5)

kmer (0~20150903+r2013-3)

atac

kraken (1.0-1)

kraken-dbgsym

last-align (885-1)

last-align

lefse (1.0.8-1)

lefse

libace-perl (1.92-7)

libace-perl

libbio-graphics-perl (2.40-2)

libbio-graphics-perl

libbio-mage-perl (20030502.3-4)

libbio-mage-perl

libbio-mage-utils-perl (20030502.0-3)

libbio-mage-utils-perl

libbiod (0.1.0-4)

libbiod0 (0.1.0-4+b2; main)

libbpp-core (2.3.1-5)

libbpp-phyl (2.3.1-10)

libbpp-phyl-omics (2.3.1-5)

libbpp-phyl-omics2-dbgsym

libbpp-popgen (2.3.1-5)

libbpp-popgen7-dbgsym

libbpp-raa (2.3.1-4)

libbpp-raa3-dbgsym

libbpp-seq (2.3.1-8)

libbpp-seq-omics (2.3.1-5)

libchado-perl (1.31-4)

chado-utils

libcolt-free-java (1.2.0+dfsg-4)

libgenome-model-tools-music-perl (0.04-3) [Uploader]

libgenome-perl (0.06-3) [Uploader]

libgff (1.0-1)

libgkarrays (2.1.0+dfsg-1)

libgkarrays1-dbgsym

libgtextutils (0.7-4)

libgzstream (1.5+dfsg-2)

libgzstream0-dbgsym

libhat-trie (0.1.2-1)

libhmsbeagle (2.1.2+20160831-5)

libhmsbeagle1v5

libics (1.6.2-1)

libjung-free-java (2.0.1+dfsg-1)

liblemon (1.3.1+dfsg-1)

liblemon-utils (1.3.1+dfsg-1+b2; main)

libncl (2.1.18+dfsg-2)

liboptions-java (0.0.20120113-2)

librandom123 (1.09+dfsg-1)

librcsb-core-wrapper (1.005-5)

python-corepywrap (1.005-5+b1; main)

librostlab (1.0.20-7)

librostlab-blast (1.0.1-8)

libsbml (5.15.2+dfsg-1)

libsbml5-python

libsis-base-java (14.12.0-4)

libsis-base-jni

libssw (1.1-1)

libtabixpp (1.0.0-3)

libtabixpp0-dbg (1.0.0-3+b1; main)

libtecla (1.6.3-2)

libtfbs-perl (0.7.1-1)

libtfbs-perl

libvcflib (1.0.0~rc1+dfsg1-6)

libvcflib-tools

libvcflib-tools-dbgsym

libvistaio (1.2.19-1)

libvistaio14-dbg

libzstd (1.3.2+dfsg2-1)

logol (1.7.7-1)

ltrsift (1.0.2-7)

ltrsift-dbg

macs (2.1.1.20160309-1)

macs (2.1.1.20160309-1+b1; main)

macsyfinder (1.0.2-5)

macsyfinder

maffilter (1.2.1+dfsg-1)

maffilter

maffilter-dbgsym

mapdamage (2.0.8+dfsg-1)

mapdamage

mapsembler2 (2.2.4+dfsg-1)

mapsembler2

maq (0.7.1-7)

maq

mash (2.0-2)

maude (2.7-2)

mauve-aligner (2.4.0+4734-3)

mauve-aligner

maxflow (3.0.4-1)

libmaxflow0

libmaxflow0-dbg

mcl (1:14-137-2)

mcl

metaphlan2 (2.6.0+ds-2)

metaphlan2

metaphlan2-data (2.6.0+ds-3)

metastudent (2.0.1-5)

metastudent

mgltools-bhtree (1.5.7-1; non-free)

mgltools-bhtree

mgltools-cadd (1.5.7-1; non-free)

mgltools-cadd

mgltools-cmolkit (1.5.7~rc1+cvs.20140424-1; non-free)

mgltools-cmolkit

mgltools-dejavu (1.5.7-1; non-free)

mgltools-dejavu

mgltools-geomutils (1.5.7-1; non-free)

mgltools-geomutils

mgltools-gle (1.5.7-1; non-free)

mgltools-gle

mgltools-mglutil (1.5.7-2; non-free)

mgltools-mglutil

mgltools-molkit (1.5.7-1; non-free)

mgltools-molkit

mgltools-networkeditor (1.5.7-1; non-free)

mgltools-networkeditor

mgltools-opengltk (1.5.7-1; non-free)

mgltools-opengltk

mgltools-pmv (1.5.7-1; non-free)

mgltools-pmv

mgltools-pmv-test

mgltools-pyautodock (1.5.7-1; non-free)

mgltools-pyautodock

mgltools-pybabel (1.5.7-1; non-free)

mgltools-pybabel

mgltools-pyglf (1.5.7-1; non-free)

mgltools-pyglf

mgltools-scenario2 (1.5.7-1; non-free)

mgltools-scenario2

mgltools-sff (1.5.7-1; non-free)

mgltools-sff

mgltools-support (1.5.7-1; non-free)

mgltools-support

mgltools-symserv (1.5.7-1; non-free)

mgltools-symserv

mgltools-utpackages (1.5.7-1; non-free)

mgltools-utpackages

mgltools-viewerframework (1.5.7-1; non-free)

mgltools-viewerframework

mgltools-vision (1.5.7+dfsg-1; non-free)

mgltools-vision

mgltools-visionlibraries (1.5.7-1; non-free)

mgltools-visionlibraries

mgltools-volume (1.5.7-1; non-free)

mgltools-volume

mgltools-webservices (1.5.7-1; non-free)

mgltools-webservices

mia (2.4.6-1)

mia-doctools

microbegps (1.0.0-2)

microbegps

microbiomeutil (20101212+dfsg1-1)

minc-tools (2.3.00+dfsg-2)

minc-tools

minia (1.6906-2)

minia

miniasm (0.2+dfsg-2)

minimap (0.2-3)

mira (4.9.6-3)

mobyle (1.5.5+dfsg-4)

mobyle

mobyle-utils

mobyle-programs (5.1.2-2)

mobyle-programs

mothur (1.39.5-2)

mrbayes (3.2.6+dfsg-2)

mrbayes-doc

mrs (6.0.5+dfsg-3)

mrs-dbgsym

mummer (3.23+dfsg-2)

mummer-doc

murasaki (1.68.6-6)

murasaki-mpi (1.68.6-6+b4; main)

muscle (1:3.8.31+dfsg-3)

mustang (3.2.3-2)

mustang-dbgsym

nanopolish (0.8.4-1)

nanopolish

ncbi-blast+ (2.6.0-1)

blast2 (1:2.6.0-1; main)

ncbi-blast+

ncbi-blast+-legacy

ncbi-entrez-direct (7.40.20170928+ds-1)

ncbi-entrez-direct

ncbi-tools6 (6.1.20170106-2)

libncbi6

ncbi-tools-x11

ncbi-vdb (2.8.2-2+dfsg-1)

ngs-sdk (1.3.0-3)

libngs-sdk1-dbgsym

njplot (2.4-7)

njplot-dbgsym

nutsqlite (1.9.9.6-1)

nutsqlite

odil (0.8.0-4)

odil

opencfu (3.9.0-2)

opencfu (3.9.0-2+b1; main)

openslide (3.4.1+dfsg-2)

libopenslide-dev

openslide-python (1.1.1-3)

opensurgsim (0.7.0-6)

libopensurgsim

orthanc-dicomweb (0.4+dfsg-1)

orthanc-dicomweb (0.4+dfsg-1+b1; main)

orthanc-postgresql (2.0-5)

orthanc-postgresql

orthanc-webviewer (2.3-2)

orthanc-webviewer

orthanc-wsi (0.4+dfsg-4)

orthanc-wsi

paleomix (1.2.7-1)

paleomix

paml (4.9e+dfsg-1)

paml

papyrus (3.7.1+dfsg-2)

paraclu (9-1)

paraclu (9-1+b2; main)

paraclu-dbgsym (9-1+b2; main)

parafly (0.0.2013.01.21-3)

parsnp (1.2+dfsg-3)

parsnp

pbalign (0.3.0-1)

pbalign

pbbam (0.7.4+ds-1)

pbbamtools (0.7.4+ds-1+b1; main)

pbbarcode (0.8.0-4)

pbbarcode

pbdagcon (0.3+20161121+ds-1)

pbdagcon (0.3+20161121+ds-1+b1; main)

pbgenomicconsensus (2.1.0-1)

pbgenomicconsensus

pbh5tools (0.8.0+dfsg-5)

pbh5tools

pbseqlib (0~20161219-2)

libblasr

libpbdata

libpbihdf

pbsuite (15.8.24+dfsg-2)

pbhoney

pbjelly

pdb2pqr (2.1.1+dfsg-2)

pdb2pqr

pdb2pqr-doc

permute (0.9-4-1)

phast (1.4+dfsg-1)

phast

phipack (0.0.20160614-2)

phipack

phybin (0.3-1)

phybin (0.3-1+b1; main)

phybin-dbgsym

phylip (1:3.696+dfsg-5)

phylip

phyml (3:3.3.20170530+dfsg-2)

phyml

phyml-dbgsym

phyutility (2.7.3-1)

picard-tools (2.8.1+dfsg-3)

piler (0~20140707-1)

pirs (2.0.2+dfsg-6)

pirs

pirs-dbgsym

pixelmed (20150917-2)

pixelmed-apps

pixelmed-www

placnet (1.03-2)

plasmidomics (0.2.0-6)

plasmidomics

plip (1.3.5+dfsg-1)

plip

pondus (0.8.0-2) [Uploader]

pondus

poretools (0.6.0+dfsg-2)

poretools

probcons (1.12-11)

probcons

probcons-extra

proda (1.0-11)

progressivemauve (1.2.0+4713-3)

proteinortho (5.15+dfsg-1)

proteinortho

proteinortho-dbgsym

psortb (3.0.4+dfsg-2)

psortb (3.0.4+dfsg-2+b2; main)

pvclust (2.0-0-2)

pycorrfit (1.0.1+dfsg-2)

pycorrfit

pynast (1.2.2-3)

pynast

pyqi (0.3.2+dfsg-2)

pyqi

pyscanfcs (0.2.3+ds-1)

pyscanfcs

python-biom-format (2.1.5+dfsg-7)

biom-format-tools (2.1.5+dfsg-7+b1; main)

python-bz2file (0.98-1)

python-bz2file

python-casmoothing (0.2-2)

python-clips (1.0.7.348+clips-3)

python-cobra (0.5.9-1)

python-cogent (1.9-11)

python-cogent-doc

python-easydev (0.9.35+dfsg-1)

python-easydev

python3-easydev

python-fitbit (0.3.0-1)

python-freecontact (1.1-2)

python-gffutils (0.8.7.1-1)

python3-gffutils

python-intervaltree-bio (1.0.1-1)

python-intervaltree-bio

python-mne (0.15.2+dfsg-2)

python-mne

python-pbcommand (0.5.3-1)

python-pbcore (1.2.11+dfsg-1)

python-pybedtools (0.7.10-2)

python3-pybedtools

python-pyfaidx (0.4.8.1-1)

python-pyflow (1.1.14-1)

python-pyflow

python-pysam (0.12.0.1+ds-4)

python-pyvcf (0.6.8-1)

pyvcf

python-qcli (0.1.1-2)

python-ruffus (2.6.3+dfsg-4)

python-ruffus-doc

python-schema-salad (2.6.20171201034858-1)

python-screed (1.0-2)

python3-screed

python-treetime (0.0+20170607-1)

python-treetime

python-treetime-examples

python-xopen (0.1.1-1)

python-xopen

qcumber (1.0.14+dfsg-1)

qcumber

qiime (1.9.1+dfsg-1)

qiime

qiime (1.9.1+dfsg-2)

qiime

qiime-dbgsym

qsopt-ex (2.5.10.3-1)

r-bioc-ensembldb (2.2.0-2)

r-bioc-variantannotation (1.24.2-1)

r-cran-assertthat (0.2.0-1)

r-cran-backports (1.1.1-1)

r-cran-beeswarm (0.2.3-2)

r-cran-crul (0.4.0-2)

r-cran-curl (3.0-2)

r-cran-dichromat (1:2.0-0-1)

r-cran-dichromat

r-cran-dplyr (0.7.4-2)

r-cran-ellipse (0.3-8-2)

r-cran-futile.logger (1.4.3-2)

r-cran-futile.options (1.0.0-3)

r-cran-googlevis (0.6.2-2)

r-cran-googlevis

r-cran-gridbase (0.4-7-3)

r-cran-gtable (0.2.0-2)

r-cran-httpcode (0.2.0-2)

r-cran-lambda.r (1.2-1)

r-cran-nmf (0.20.6-1)

r-cran-nnls (1.4-1)

r-cran-pkgconfig (2.0.1-2)

r-cran-plogr (0.1-1-2)

r-cran-plyr (1.8.4-1)

r-cran-praise (1.0.0-2)

r-cran-psy (1.1-3)

r-cran-registry (0.3-2)

r-cran-reshape2 (1.4.2-1)

r-cran-scatterd3 (0.8.1+dfsg-3)

r-cran-segmented (0.5-2.2-1)

r-cran-seqinr (3.4-5-1)

r-cran-seqinr (3.4-5-1+b1; main)

r-cran-seroincidence (1.0.5-2)

r-cran-shape (1.4.3-1)

r-cran-shiny (1.0.5+dfsg-2)

r-cran-shiny

r-cran-testit (0.7-1)

r-cran-treescape (1.10.18-8)

r-cran-treescape

r-cran-treespace (1.0.0-1)

r-cran-treespace

raccoon (1.0b-3; contrib)

raccoon

radiant (2.7+dfsg-1)

radiant

rambo-k (1.21+dfsg-1)

rambo-k

rapmap (0.5.0+dfsg-2)

rapmap

raxml (8.2.11+dfsg-1)

raxml

raxml-dbgsym

ray (2.3.1-5)

ray-extra

readseq (1-12)

readseq

reapr (1.0.18+dfsg-3)

relion (1.4+dfsg-3)

repeatmasker-recon (1.08-3)

repeatmasker-recon (1.08-3+b1; main)

rna-star (2.5.3a+dfsg-3)

roary (3.11.0+dfsg-1)

roary

rsem (1.2.31+dfsg-1)

rsem

rtax (0.984-5)

ruby-rgfa (1.3.1-1)

ruby-rgfa

runcircos-gui (0.0+20160403-1)

runcircos-gui

saint (2.5.0+dfsg-2)

salmon (0.7.2+ds1-3)

sambamba (0.6.6-1)

sambamba (0.6.6-1+b2; main)

samtools (1.6-3)

samtools

samtools-legacy (0.1.19-2)

scythe (0.994-4)

seer (1.1.4-1)

seer (1.1.4-1+b1; main)

seqan2 (2.3.2+dfsg2-4)

seqan-apps

seqan2 (2.3.2.000platform-issues7-41f58c3+dfsg-2)

seqan-apps

seqsero (1.0-1)

seqsero

sga (0.10.14-2)

sga-dbgsym

sga (0.10.15-3)

sga

sga-dbgsym

sift (4.0.3b-6; non-free)

sift

snakemake (4.3.1-1)

snakemake

snap (2013-11-29-8)

snap

snap-aligner (1.0~beta.18+dfsg-1)

snap-aligner-dbgsym

sniffles (1.0.7+ds-1)

sniffles

snp-sites (2.3.3-2)

snpomatic (1.0-3)

soapdenovo (1.05-4)

soapdenovo-dbgsym

sofa-framework (1.0~beta4-12)

sortmerna (2.1-2)

sortmerna

spades (3.10.1+dfsg-3)

spades

spdlog (1:0.14.0-1)

sphinxcontrib-autoprogram (0.1.2-1)

sphinxcontrib-autoprogram

spread-phy (1.0.7+dfsg-1)

squizz (0.99c+dfsg-1)

squizz

sra-sdk (2.8.2-3+dfsg-1)

sra-toolkit

srst2 (0.2.0-5)

srst2

ssake (3.8.5-1)

ssake

sspace (2.1.1+dfsg-3)

sspace

stacks (1.46-1)

stacks

stacks-web

staden (2.0.0+b11-2)

staden (2.0.0+b11-2+b1; main)

staden-io-lib (1.14.9-4)

libstaden-read-dev

staden-io-lib-examples

staden-io-lib-utils

suitename (0.3.070628-1)

suitename-dbgsym (0.3.070628-1+b1; main)

sumaclust (1.0.31-1)

sumaclust-dbgsym

sumatra (1.0.31-1)

sumatra-dbgsym

swarm-cluster (2.1.12+dfsg-1)

swarm

tantan (13-4)

theseus (3.3.0-6)

theseus

tifffile (20170914-1)

tnseq-transit (2.0.2-1)

tnseq-transit

tophat (2.1.1+dfsg1-1)

tophat

toppred (1.10-4)

toppred

transrate-tools (1.0.0-1)

transrate-tools-dbgsym (1.0.0-1+b1; main)

trinityrnaseq (2.2.0+dfsg-4)

trinityrnaseq

trinityrnaseq-dbgsym

tvc (5.0.3+dfsg-2)

tvc (5.0.3+dfsg-2+b1; main)

uc-echo (1.12-9)

uc-echo (1.12-9+b1; main)

ugene (1.25.0+dfsg-1; non-free)

ugene

vcftools (0.1.14+dfsg-4)

velvet (1.2.10+dfsg1-3)

velvet-dbgsym (1.2.10+dfsg1-3+b1; main)

velvet-example

velvet-tests

velvet (1.2.10+dfsg1-4)

velvet-dbgsym

velvet-example

velvet-long

velvet-tests

visionegg (1.2.1-3)

volpack (1.0b3-6)

libvolpack1-dev

vsearch (2.4.3-1)

vsearch

vtk-dicom (0.7.10-1)

wise (2.4.1-20)

wise-data

xmedcon (0.14.1-2)

libmdc2-dev

medcon

xmedcon