Andreas Tille

At the time of the last Lintian run, the following possible problems were found in packages maintained by Andreas Tille <tille@debian.org>, listed by source package. See also the report showing only errors and warnings. Also see their QA overview.

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/abacas.git
  • vcs-git https://anonscm.debian.org/git/debian-med/abacas.git

abacas

• W manpage-has-errors-from-man
  • usr/share/man/man1/abacas.1.gz 20: warning [p 1, 3.0i, div `an-div', 0.0i]: cannot adjust line

• I debian-rules-parses-dpkg-parsechangelog
  • (line 10)
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 123)
  • debian/changelog (line 180)
  • debian/changelog (line 213)
  • debian/control (line 36)
  • debian/control (line 59)
  • debian/control (line 79)
• I out-of-date-standards-version
  • 3.9.8 (released 2016-04-06) (current is 4.2.1)
• I quilt-patch-missing-description
  • remove_response.pdf.patch
• P source-contains-prebuilt-javascript-object
  • doc/extra_javascript/jQuery-jQuery-UI-Dialog-Enhancement-Plugin-dialogextend/build/jquery.dialogextend.min.js
  • doc/extra_javascript/jquery.dialogextend.min.js
• O source-is-missing
  • doc/extra_javascript/jquery.dialogextend.min.js
• I unused-file-paragraph-in-dep5-copyright
  • paragraph at line 15
• I wildcard-matches-nothing-in-dep5-copyright
  • doc/versioning/leaflet.cls (paragraph at line 15)

abinit

• W binary-without-manpage
  • usr/bin/aim
  • usr/bin/anaddb
  • usr/bin/band2eps
  • usr/bin/bsepostproc
  • usr/bin/conducti
  • usr/bin/cut3d
  • usr/bin/dummy_tests
  • usr/bin/fftprof
  • usr/bin/fold2Bloch
  • usr/bin/ioprof
  • usr/bin/lapackprof
  • usr/bin/macroave
  • usr/bin/mrgddb
  • usr/bin/mrgdv
  • usr/bin/mrggkk
  • usr/bin/mrgscr
  • usr/bin/optic
  • usr/bin/tdep
  • usr/bin/ujdet
  • usr/bin/vdw_kernelgen
• I hardening-no-bindnow
  • usr/bin/abinit
  • usr/bin/aim
  • usr/bin/anaddb
  • usr/bin/band2eps
  • usr/bin/bsepostproc
  • usr/bin/conducti
  • usr/bin/cut3d
  • usr/bin/dummy_tests
  • usr/bin/fftprof
  • usr/bin/fold2Bloch
  • usr/bin/ioprof
  • usr/bin/lapackprof
  • usr/bin/macroave
  • usr/bin/mrgddb
  • usr/bin/mrgdv
  • usr/bin/mrggkk
  • usr/bin/mrgscr
  • usr/bin/multibinit
  • usr/bin/optic
  • usr/bin/tdep
  • usr/bin/ujdet
  • usr/bin/vdw_kernelgen
• I spelling-error-in-binary
  • usr/bin/abinit ADVICED ADVISED
  • usr/bin/abinit Informations Information
  • usr/bin/abinit Recomended Recommended
  • usr/bin/abinit Reseting Resetting
  • usr/bin/abinit Skiping Skipping
  • usr/bin/abinit accomodate accommodate
  • usr/bin/abinit choosen chosen
  • usr/bin/abinit desactivate deactivate
  • usr/bin/abinit developped developed
  • usr/bin/abinit doesnt doesn't
  • usr/bin/abinit embarrasing embarrassing
  • usr/bin/abinit enought enough
  • usr/bin/abinit explicitely explicitly
  • usr/bin/abinit forbiden forbidden
  • usr/bin/abinit happend happened
  • usr/bin/abinit indeces indices
  • usr/bin/abinit istead instead
  • usr/bin/abinit keywork keyword
  • usr/bin/abinit meaningfull meaningful
  • usr/bin/abinit occured occurred
  • usr/bin/abinit occurence occurrence
  • usr/bin/abinit occurences occurrences
  • usr/bin/abinit permit to permit one to
  • usr/bin/abinit retured returned
  • usr/bin/abinit segement segment
  • usr/bin/abinit tranformation transformation
  • usr/bin/abinit unknow unknown
  • usr/bin/abinit upto up to
  • usr/bin/abinit wiH with
  • usr/bin/abinit withthe with the
  • usr/bin/abinit writen written
  • usr/bin/aim keywork keyword
  • usr/bin/aim occurence occurrence
  • usr/bin/aim occurences occurrences
  • usr/bin/aim succesfully successfully
  • usr/bin/anaddb Informations Information
  • usr/bin/anaddb accomodate accommodate
  • usr/bin/anaddb explicitely explicitly
  • usr/bin/anaddb keywork keyword
  • usr/bin/anaddb occurence occurrence
  • usr/bin/anaddb occurences occurrences
  • usr/bin/anaddb upto up to
  • usr/bin/band2eps Informations Information
  • usr/bin/band2eps keywork keyword
  • usr/bin/band2eps occurence occurrence
  • usr/bin/band2eps occurences occurrences
  • usr/bin/conducti accomodate accommodate
  • usr/bin/conducti explicitely explicitly
  • usr/bin/conducti upto up to
  • usr/bin/cut3d accomodate accommodate
  • usr/bin/cut3d explicitely explicitly
  • usr/bin/cut3d lenth length
  • usr/bin/cut3d preceeded preceded
  • usr/bin/cut3d upto up to
  • usr/bin/fold2Bloch accomodate accommodate
  • usr/bin/fold2Bloch explicitely explicitly
  • usr/bin/fold2Bloch upto up to
  • usr/bin/ioprof accomodate accommodate
  • usr/bin/ioprof explicitely explicitly
  • usr/bin/ioprof upto up to
  • usr/bin/mrgddb Informations Information
  • usr/bin/mrgddb keywork keyword
  • usr/bin/mrgddb occurence occurrence
  • usr/bin/mrgddb occurences occurrences
  • usr/bin/mrgdv explicitely explicitly
  • usr/bin/mrggkk accomodate accommodate
  • usr/bin/mrggkk explicitely explicitly
  • usr/bin/mrggkk upto up to
  • usr/bin/mrgscr accomodate accommodate
  • usr/bin/mrgscr explicitely explicitly
  • usr/bin/mrgscr retured returned
  • usr/bin/mrgscr unknow unknown
  • usr/bin/mrgscr upto up to
  • usr/bin/multibinit Recomended Recommended
  • usr/bin/multibinit Reseting Resetting
  • usr/bin/multibinit Skiping Skipping
  • usr/bin/multibinit accomodate accommodate
  • usr/bin/multibinit begining beginning
  • usr/bin/multibinit choosen chosen
  • usr/bin/multibinit desactivate deactivate
  • usr/bin/multibinit doesnt doesn't
  • usr/bin/multibinit embarrasing embarrassing
  • usr/bin/multibinit enought enough
  • usr/bin/multibinit explicitely explicitly
  • usr/bin/multibinit forbiden forbidden
  • usr/bin/multibinit happend happened
  • usr/bin/multibinit informations information
  • usr/bin/multibinit istead instead
  • usr/bin/multibinit keywork keyword
  • usr/bin/multibinit meaningfull meaningful
  • usr/bin/multibinit occured occurred
  • usr/bin/multibinit occurence occurrence
  • usr/bin/multibinit occurences occurrences
  • usr/bin/multibinit permit to permit one to
  • usr/bin/multibinit segement segment
  • usr/bin/multibinit somes some
  • usr/bin/multibinit upto up to
  • usr/bin/optic accomodate accommodate
  • usr/bin/optic explicitely explicitly
  • usr/bin/optic upto up to
  • usr/bin/tdep Informations Information
  • usr/bin/tdep explicitely explicitly
  • usr/bin/tdep independant independent
  • usr/bin/tdep keywork keyword
  • usr/bin/tdep occurence occurrence
  • usr/bin/tdep occurences occurrences
  • usr/bin/tdep symetric symmetric
  • usr/bin/tdep upto up to
  • usr/bin/ujdet keywork keyword
  • usr/bin/ujdet occurence occurrence
  • usr/bin/ujdet occurences occurrences

abinit-doc

• I package-contains-empty-directory
  • usr/share/doc/abinit/html/presentation/
• I possible-documentation-but-no-doc-base-registration

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 24)

abyss

• X binary-file-built-without-LFS-support
  • usr/lib/abyss/KAligner
  • usr/lib/abyss/PathConsensus
  • usr/lib/abyss/abyss-align
• W binary-without-manpage
  • usr/bin/DistanceEst
  • usr/bin/DistanceEst
  • usr/bin/abyss-fixmate
  • usr/bin/abyss-fixmate
• I possible-documentation-but-no-doc-base-registration
• I spelling-error-in-binary
  • usr/lib/abyss/Consensus ommited omitted
  • usr/lib/abyss/Consensus ommited omitted
  • usr/lib/abyss/PathConsensus wether whether
  • usr/lib/abyss/PathConsensus wether whether
  • usr/lib/abyss/SimpleGraph paramter parameter
  • usr/lib/abyss/SimpleGraph paramter parameter
  • usr/lib/abyss/abyss-align wether whether
  • usr/lib/abyss/abyss-align wether whether
  • usr/lib/abyss/abyss-sealer superceded superseded
  • usr/lib/abyss/abyss-sealer superceded superseded
  • usr/lib/abyss/abyss-tofastq ouput output
  • usr/lib/abyss/abyss-tofastq ouput output
• I spelling-error-in-manpage
  • usr/share/man/man1/abyss-pe.1.gz varible variable
  • usr/share/man/man1/abyss-pe.1.gz varible variable
• E wrong-path-for-interpreter
  • usr/lib/abyss/abyss-fatoagp (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/abyss/abyss-fatoagp (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/abyss/abyss-samtoafg (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/abyss/abyss-samtoafg (#!/usr/bin/env perl != /usr/bin/perl)

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • ftp://ftp.sanger.ac.uk/pub/project/acedb/SUPPORTED/ACEDB-source\.([0-9.]+)\.tar\.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 147)
• I override_dh_auto_test-does-not-check-DEB_BUILD_OPTIONS
  • (line 37)
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-empty-directory
  • waction/
  • wdemo/database/
  • wdoc/Interfaces/
  • wemap/
  • whelp/syntax/
  • wsyn/
  • wt1/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/acedb.git
  • vcs-git https://anonscm.debian.org/git/debian-med/acedb.git

acedb-other

• X binary-file-built-without-LFS-support
  • usr/bin/efetch
• I hardening-no-fortify-functions
  • usr/bin/efetch
  • usr/bin/efetch

• P debian-watch-does-not-check-gpg-signature
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/adapterremoval.git
  • vcs-git https://anonscm.debian.org/git/debian-med/adapterremoval.git

adapterremoval

• X binary-file-built-without-LFS-support
  • usr/bin/AdapterRemoval
• I hardening-no-fortify-functions
  • usr/bin/AdapterRemoval
  • usr/bin/AdapterRemoval
• W manpage-has-errors-from-man
  • usr/share/man/man1/AdapterRemoval.1.gz 232: warning [p 4, 4.3i]: can't break line
  • usr/share/man/man1/AdapterRemoval.1.gz 232: warning [p 4, 4.3i]: can't break line
• W privacy-breach-generic
  • usr/share/doc/adapterremoval/README.html [<img alt="coveralls" src="https://img.shields.io/coveralls/mikkelschubert/adapterremoval.svg" />] (https://img.shields.io/coveralls/mikkelschubert/adapterremoval.svg)
  • usr/share/doc/adapterremoval/README.html [<img alt="coveralls" src="https://img.shields.io/coveralls/mikkelschubert/adapterremoval.svg" />] (https://img.shields.io/coveralls/mikkelschubert/adapterremoval.svg)
  • usr/share/doc/adapterremoval/README.html [<img alt="travis" src="https://img.shields.io/travis/mikkelschubert/adapterremoval/master.svg" />] (https://img.shields.io/travis/mikkelschubert/adapterremoval/master.svg)
  • usr/share/doc/adapterremoval/README.html [<img alt="travis" src="https://img.shields.io/travis/mikkelschubert/adapterremoval/master.svg" />] (https://img.shields.io/travis/mikkelschubert/adapterremoval/master.svg)
• I spelling-error-in-binary
  • usr/bin/AdapterRemoval pres press
• I spelling-error-in-manpage
  • usr/share/man/man1/AdapterRemoval.1.gz lenght length
  • usr/share/man/man1/AdapterRemoval.1.gz lenght length
  • usr/share/man/man1/AdapterRemoval.1.gz multipled multiplied
  • usr/share/man/man1/AdapterRemoval.1.gz multipled multiplied

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/adun.app.git
  • vcs-git https://anonscm.debian.org/git/debian-med/adun.app.git

adun-core (0.81-11+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/AdunServer
  • usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13
  • usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/libMolTalk.so.3.0.1
  • usr/lib/GNUstep/Frameworks/ULFramework.framework/Versions/0/libULFramework.so.0.6
• X shlib-calls-exit
  • usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13
  • usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13
  • usr/lib/adun.app/libXMLLib.so.0.1
  • usr/lib/adun.app/libXMLLib.so.0.1
  • usr/lib/adun.app/libadun_base.so.0.0.1
  • usr/lib/adun.app/libadun_base.so.0.0.1
• I spelling-error-in-binary
  • usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13 onthe on the
  • usr/lib/GNUstep/Frameworks/AdunKernel.framework/Versions/0/libAdunKernel.so.0.13 onthe on the
  • usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/libMolTalk.so.3.0.1 CONECT CONNECT
  • usr/lib/GNUstep/Frameworks/MolTalk.framework/Versions/3/libMolTalk.so.3.0.1 CONECT CONNECT

adun.app (0.81-11+b1; main)

• X binary-file-built-without-LFS-support
  • usr/lib/GNUstep/Applications/UL.app/UL
• I wrong-section-according-to-package-name
  • adun.app => gnustep
  • adun.app => gnustep

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 168)
  • debian/changelog (line 29)
  • debian/changelog (line 35)
  • debian/changelog (line 4)
  • debian/changelog (line 48)
  • debian/changelog (line 49)
  • debian/changelog (line 5)
  • debian/changelog (line 53)
  • debian/changelog (line 55)
  • debian/changelog (line 56)
  • debian/changelog (line 66)
  • debian/changelog (line 68)
  • debian/rules (line 18)
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• I unused-file-paragraph-in-dep5-copyright
  • paragraph at line 41
• I wildcard-matches-nothing-in-dep5-copyright
  • debian/bundle-glademm.patch (paragraph at line 41)

aeskulap

• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/aeskulap.desktop
  • usr/share/applications/aeskulap.desktop

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/alien-hunter.git
  • vcs-git https://anonscm.debian.org/git/debian-med/alien-hunter.git

alien-hunter

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
• W package-installs-java-bytecode
  • usr/share/alien_hunter/ChangepointLeft$1.class
  • usr/share/alien_hunter/ChangepointLeft.class
  • usr/share/alien_hunter/ChangepointRight$1.class
  • usr/share/alien_hunter/ChangepointRight.class

• W configure-generated-file-in-source
  • web/src/cgi.tcl-1.10/config.log
  • web/src/cgi.tcl-1.10/config.status
• I debian-rules-contains-unnecessary-get-orig-source-target
• I debian-rules-parses-dpkg-parsechangelog
  • (line 53)
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://alpine.freeiz.com/alpine/release/index.html
• P debug-symbol-migration-possibly-complete
  • --dbgsym-migration='alpine-dbg (line 44)
• E missing-notice-file-for-apache-license
  • imap/NOTICE
• P no-dep5-copyright
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-autogenerated-visual-c++-file
  • ldap/libldap.mak
• O source-contains-prebuilt-javascript-object
  • web/cgi/alpine/2.0/lib/mailbox.js line length is 503 characters (>256)
• O source-is-missing
  • web/cgi/alpine/2.0/lib/mailbox.js line length is 503 characters (>256)
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/collab-maint/alpine.git
  • vcs-git https://anonscm.debian.org/git/collab-maint/alpine.git

alpine (2.21+dfsg1-1+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/alpine
  • usr/bin/rpdump
  • usr/bin/rpload
• I hardening-no-bindnow
  • usr/bin/alpine
  • usr/bin/alpine
  • usr/bin/rpdump
  • usr/bin/rpdump
  • usr/bin/rpload
  • usr/bin/rpload
• W mail-transport-agent-dependency-does-not-specify-default-mta
  • suggests: aspell, mail-transport-agent | exim4
  • suggests: aspell, mail-transport-agent | exim4
• E missing-depends-on-sensible-utils
  • usr/bin/alpine
  • usr/bin/alpine
• I spelling-error-in-binary
  • usr/bin/alpine Pres Press
  • usr/bin/alpine Pres Press
  • usr/bin/alpine Subcribe Subscribe
  • usr/bin/alpine Subcribe Subscribe
  • usr/bin/alpine accomodate accommodate
  • usr/bin/alpine accomodate accommodate
  • usr/bin/alpine allows to allows one to
  • usr/bin/alpine allows to allows one to
  • usr/bin/alpine connnect connect
  • usr/bin/alpine connnect connect
  • usr/bin/alpine desription description
  • usr/bin/alpine desription description
  • usr/bin/alpine dont don't
  • usr/bin/alpine dont don't
  • usr/bin/alpine environent environment
  • usr/bin/alpine environent environment
  • usr/bin/alpine explictly explicitly
  • usr/bin/alpine explictly explicitly
  • usr/bin/alpine feauture feature
  • usr/bin/alpine feauture feature
  • usr/bin/alpine filesytem filesystem
  • usr/bin/alpine filesytem filesystem
  • usr/bin/alpine identifer identifier
  • usr/bin/alpine identifer identifier
  • usr/bin/alpine immmediately immediately
  • usr/bin/alpine immmediately immediately
  • usr/bin/alpine messsage message
  • usr/bin/alpine messsage message
  • usr/bin/alpine overriden overridden
  • usr/bin/alpine overriden overridden
  • usr/bin/alpine perfom perform
  • usr/bin/alpine perfom perform
  • usr/bin/alpine postion position
  • usr/bin/alpine postion position
  • usr/bin/alpine specfied specified
  • usr/bin/alpine specfied specified
  • usr/bin/alpine supress suppress
  • usr/bin/alpine supress suppress
  • usr/bin/alpine tranport transport
  • usr/bin/alpine tranport transport
  • usr/bin/alpine udpated updated
  • usr/bin/alpine udpated updated
  • usr/bin/alpine usualy usually
  • usr/bin/alpine usualy usually
  • usr/bin/rpdump identifer identifier
  • usr/bin/rpdump identifer identifier
  • usr/bin/rpload identifer identifier
  • usr/bin/rpload identifer identifier

alpine-doc

• I possible-documentation-but-no-doc-base-registration

alpine-pico (2.21+dfsg1-1+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/pico.alpine
• I hardening-no-bindnow
  • usr/bin/pico.alpine
  • usr/bin/pico.alpine
• W manpage-has-errors-from-man
  • usr/share/man/man1/pico.alpine.1.gz 178: warning: numeric expression expected (got `n')
  • usr/share/man/man1/pico.alpine.1.gz 178: warning: numeric expression expected (got `n')

pilot (2.21+dfsg1-1+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/pilot
• I hardening-no-bindnow
  • usr/bin/pilot
  • usr/bin/pilot

• P debian-watch-does-not-check-gpg-signature
• I testsuite-autopkgtest-missing

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 132)
  • debian/changelog (line 134)
  • debian/changelog (line 244)
  • debian/changelog (line 58)
• I testsuite-autopkgtest-missing

altree

• I hardening-no-bindnow
  • usr/lib/i386-linux-gnu/perl5/5.26/auto/ALTree/CUtils/CUtils.so
  • usr/lib/x86_64-linux-gnu/perl5/5.26/auto/ALTree/CUtils/CUtils.so
• I spelling-error-in-manpage
  • usr/share/man/man1/altree.1p.gz allows to allows one to
  • usr/share/man/man1/altree.1p.gz allows to allows one to

altree-examples

• X duplicate-files
  • usr/share/doc/altree-examples/create_file/phy-paml_file/NUM usr/share/doc/altree-examples/create_file/phy-paml_file/nb_cas_control.txt usr/share/doc/altree-examples/paml/unrooted_absent/association/nb_cas_control.txt usr/share/doc/altree-examples/phylip/ancestor_absent/association/nb_cas_controls.txt usr/share/doc/altree-examples/phylip/outgroup_absent/association/nb_cas_controls.txt
  • usr/share/doc/altree-examples/create_file/phy-paml_file/trio.phy usr/share/doc/altree-examples/create_file/phy-paml_file/trio.prephy
  • usr/share/doc/altree-examples/paml/tree_building_using_phyML/trio2.phy usr/share/doc/altree-examples/paml/unrooted_absent/association/trio2.phy usr/share/doc/altree-examples/paml/unrooted_present/association/trio2.phy usr/share/doc/altree-examples/paml/unrooted_present/localisation/trio2.phy
  • usr/share/doc/altree-examples/paml/tree_building_using_phyML/trio2.phy_phyml_tree.txt usr/share/doc/altree-examples/paml/unrooted_absent/association/trio2.phy_phyml_tree.txt usr/share/doc/altree-examples/paml/unrooted_present/association/trio2.phy_phyml_tree.txt usr/share/doc/altree-examples/paml/unrooted_present/localisation/trio2.phy_phyml_tree.txt
  • usr/share/doc/altree-examples/paml/unrooted_absent/association/baseml.ctl usr/share/doc/altree-examples/paml/unrooted_present/association/baseml.ctl
  • usr/share/doc/altree-examples/paml/unrooted_absent/association/rst1 usr/share/doc/altree-examples/paml/unrooted_present/association/rst1 usr/share/doc/altree-examples/paml/unrooted_present/localisation/rst1
  • usr/share/doc/altree-examples/paml/unrooted_present/association/nb_cas_control.txt usr/share/doc/altree-examples/paml/unrooted_present/localisation/nb_cas_controls.txt
  • usr/share/doc/altree-examples/paup/ancestor_absent/association/nb_cas_control.txt usr/share/doc/altree-examples/paup/ancestor_absent/localisation/nb_cas_control.txt usr/share/doc/altree-examples/paup/outgr_absent/association/nb_cas_control.txt usr/share/doc/altree-examples/paup/outgr_absent/localisation/nb_cas_control.txt usr/share/doc/altree-examples/paup/unrooted_absent/association/nb_cas_control.txt usr/share/doc/altree-examples/paup/unrooted_absent/localisation/nb_cas_control.txt
  • usr/share/doc/altree-examples/paup/ancestor_present/association/caco.paup usr/share/doc/altree-examples/paup/ancestor_present/localisation/caco.paup
  • usr/share/doc/altree-examples/paup/ancestor_present/localisation/nb_cas_control.txt usr/share/doc/altree-examples/paup/outgr_present/association/nb_cas_control.txt usr/share/doc/altree-examples/paup/outgr_present/localisation/nb_cas_control.txt
  • usr/share/doc/altree-examples/paup/outgr_absent/association/caco.paup usr/share/doc/altree-examples/paup/outgr_absent/localisation/caco.paup usr/share/doc/altree-examples/paup/outgr_present/association/caco.paup usr/share/doc/altree-examples/paup/outgr_present/localisation/caco.paup
  • usr/share/doc/altree-examples/paup/outgr_absent/localisation/caco.loc usr/share/doc/altree-examples/paup/outgr_present/localisation/caco.loc
  • usr/share/doc/altree-examples/paup/unrooted_present/association/nb_cas_control.txt usr/share/doc/altree-examples/paup/unrooted_present/localisation/nb_cas_control.txt
  • usr/share/doc/altree-examples/phylip/outgroup_absent/association/outfile.gz usr/share/doc/altree-examples/phylip/outgroup_present/association/outfile.gz
  • usr/share/doc/altree-examples/phylip/outgroup_absent/association/outtree.gz usr/share/doc/altree-examples/phylip/outgroup_present/association/outtree.gz
  • usr/share/doc/altree-examples/phylip/outgroup_absent/association/trio.phy usr/share/doc/altree-examples/phylip/outgroup_present/association/trio.phy

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 149)

amap-align

• X binary-file-built-without-LFS-support
  • usr/bin/amap
• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL
• I hardening-no-fortify-functions
  • usr/bin/amap
  • usr/bin/amap

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 140)
  • debian/changelog (line 21)
  • debian/changelog (line 285)
  • debian/changelog (line 30)
  • debian/changelog (line 32)
  • debian/changelog (line 33)
  • debian/changelog (line 34)
  • debian/changelog (line 42)
  • debian/changelog (line 67)
  • debian/changelog (line 76)
  • debian/changelog (line 77)
  • debian/control (line 4)
• P source-contains-empty-directory
  • doc/reference/tmpl/
• I testsuite-autopkgtest-missing
• P wiki-copyright-format-uri
  • http://wiki.debian.org/Proposals/CopyrightFormat

amide (1.0.5-11+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/amide
• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GFDL
  • usr/share/common-licenses/GFDL
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/amide.desktop
  • usr/share/applications/amide.desktop
• I spelling-error-in-binary
  • usr/bin/amide caculate calculate
  • usr/bin/amide caculate calculate
  • usr/bin/amide discontinous discontinuous
  • usr/bin/amide discontinous discontinuous
  • usr/bin/amide reseting resetting
  • usr/bin/amide reseting resetting

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 102)
  • debian/changelog (line 177)
  • debian/changelog (line 182)
  • debian/rules (line 40)
• W obsolete-url-in-packaging
  • debian/control http://code.google.com/p/ampliconnoise/
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-empty-directory
  • bin/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/ampliconnoise.git
  • vcs-git https://anonscm.debian.org/git/debian-med/ampliconnoise.git

ampliconnoise (1.29-7+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/FCluster
  • usr/bin/FastaUnique
  • usr/bin/NDist
  • usr/bin/Perseus
  • usr/bin/PerseusD
  • usr/bin/PyroDist
  • usr/bin/PyroNoise
  • usr/bin/PyroNoiseA
  • usr/bin/PyroNoiseM
  • usr/bin/SeqDist
  • usr/bin/SeqNoise
  • usr/bin/SplitClusterClust
  • usr/bin/SplitClusterEven
• I hardening-no-fortify-functions
  • usr/bin/FCluster
  • usr/bin/FCluster
  • usr/bin/FastaUnique
  • usr/bin/FastaUnique
  • usr/bin/NDist
  • usr/bin/NDist
  • usr/bin/Perseus
  • usr/bin/Perseus
  • usr/bin/PerseusD
  • usr/bin/PerseusD
  • usr/bin/PyroDist
  • usr/bin/PyroDist
  • usr/bin/PyroNoise
  • usr/bin/PyroNoise
  • usr/bin/PyroNoiseA
  • usr/bin/PyroNoiseA
  • usr/bin/PyroNoiseM
  • usr/bin/PyroNoiseM
  • usr/bin/SeqDist
  • usr/bin/SeqDist
  • usr/bin/SeqNoise
  • usr/bin/SeqNoise
  • usr/bin/SplitClusterClust
  • usr/bin/SplitClusterClust
  • usr/bin/SplitClusterEven
  • usr/bin/SplitClusterEven

ampliconnoise-dbgsym (1.29-7+b1; main)

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/5b/baf470ff4021df694fe31848569e906309c527.debug
  • usr/lib/debug/.build-id/df/88df37a9849ebcf2acbd80bbc788aa94d7209f.debug

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://bioinf.eva.mpg.de/anfo/
• P file-contains-trailing-whitespace
  • debian/changelog (line 65)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/anfo.git
  • vcs-git https://anonscm.debian.org/git/debian-med/anfo.git

anfo

• I spelling-error-in-manpage
  • usr/share/man/man1/anfo-tool.1.gz choosen chosen
  • usr/share/man/man1/anfo-tool.1.gz choosen chosen
  • usr/share/man/man1/anfo-tool.1.gz occuring occurring
  • usr/share/man/man1/anfo-tool.1.gz occuring occurring
  • usr/share/man/man1/anfo-tool.1.gz representaion representation
  • usr/share/man/man1/anfo-tool.1.gz representaion representation
  • usr/share/man/man1/anfo.1.gz optinally optionally
  • usr/share/man/man1/anfo.1.gz optinally optionally

libanfo0

• I hardening-no-fortify-functions
  • usr/lib/i386-linux-gnu/libanfo.so.0.0.0
  • usr/lib/x86_64-linux-gnu/libanfo.so.0.0.0
• I no-symbols-control-file
  • usr/lib/i386-linux-gnu/libanfo.so.0.0.0
  • usr/lib/x86_64-linux-gnu/libanfo.so.0.0.0

• I debian-rules-parses-dpkg-parsechangelog
  • (line 9)
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://download.arb-home.de/release/
• P file-contains-trailing-whitespace
  • debian/changelog (line 123)
  • debian/changelog (line 129)
  • debian/changelog (line 174)
  • debian/changelog (line 282)
  • debian/changelog (line 53)
  • debian/changelog (line 725)
  • debian/changelog (line 88)
  • debian/changelog (line 91)
  • debian/rules (line 117)
  • debian/rules (line 4)
  • debian/rules (line 97)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• X maybe-not-arch-all-binnmuable
  • arb -> arb-common
• I missing-explanation-for-contrib-or-non-free-package
• I testsuite-autopkgtest-missing

arb

• I hardening-no-bindnow
  • usr/lib/arb/bin/CAP2
  • usr/lib/arb/bin/CAP2
  • usr/lib/arb/bin/Restriction
  • usr/lib/arb/bin/Restriction
  • usr/lib/arb/bin/Zuk_to_gen
  • usr/lib/arb/bin/Zuk_to_gen
  • usr/lib/arb/bin/arb_2_ascii
  • usr/lib/arb/bin/arb_2_ascii
  • usr/lib/arb/bin/arb_2_bin
  • usr/lib/arb/bin/arb_2_bin
  • usr/lib/arb/bin/arb_a2ps
  • usr/lib/arb/bin/arb_a2ps
  • usr/lib/arb/bin/arb_consensus_tree
  • usr/lib/arb/bin/arb_consensus_tree
  • usr/lib/arb/bin/arb_convert_aln
  • usr/lib/arb/bin/arb_convert_aln
  • usr/lib/arb/bin/arb_db_server
  • usr/lib/arb/bin/arb_db_server
  • usr/lib/arb/bin/arb_dist
  • usr/lib/arb/bin/arb_dist
  • usr/lib/arb/bin/arb_dnarates
  • usr/lib/arb/bin/arb_dnarates
  • usr/lib/arb/bin/arb_edit4
  • usr/lib/arb/bin/arb_edit4
  • usr/lib/arb/bin/arb_export_rates
  • usr/lib/arb/bin/arb_export_rates
  • usr/lib/arb/bin/arb_export_tree
  • usr/lib/arb/bin/arb_export_tree
  • usr/lib/arb/bin/arb_flush_mem
  • usr/lib/arb/bin/arb_flush_mem
  • usr/lib/arb/bin/arb_gene_probe
  • usr/lib/arb/bin/arb_gene_probe
  • usr/lib/arb/bin/arb_help2xml
  • usr/lib/arb/bin/arb_help2xml
  • usr/lib/arb/bin/arb_message
  • usr/lib/arb/bin/arb_message
  • usr/lib/arb/bin/arb_naligner
  • usr/lib/arb/bin/arb_naligner
  • usr/lib/arb/bin/arb_name_server
  • usr/lib/arb/bin/arb_name_server
  • usr/lib/arb/bin/arb_notify
  • usr/lib/arb/bin/arb_notify
  • usr/lib/arb/bin/arb_ntree
  • usr/lib/arb/bin/arb_ntree
  • usr/lib/arb/bin/arb_pars
  • usr/lib/arb/bin/arb_pars
  • usr/lib/arb/bin/arb_phylo
  • usr/lib/arb/bin/arb_phylo
  • usr/lib/arb/bin/arb_primer
  • usr/lib/arb/bin/arb_primer
  • usr/lib/arb/bin/arb_probe
  • usr/lib/arb/bin/arb_probe
  • usr/lib/arb/bin/arb_proto_2_xsub
  • usr/lib/arb/bin/arb_proto_2_xsub
  • usr/lib/arb/bin/arb_pt_server
  • usr/lib/arb/bin/arb_pt_server
  • usr/lib/arb/bin/arb_read_tree
  • usr/lib/arb/bin/arb_read_tree
  • usr/lib/arb/bin/arb_replace
  • usr/lib/arb/bin/arb_replace
  • usr/lib/arb/bin/arb_rnacma
  • usr/lib/arb/bin/arb_rnacma
  • usr/lib/arb/bin/arb_treegen
  • usr/lib/arb/bin/arb_treegen
  • usr/lib/arb/bin/arb_wetc
  • usr/lib/arb/bin/arb_wetc
  • usr/lib/arb/bin/axml
  • usr/lib/arb/bin/axml
  • usr/lib/arb/bin/clustalv
  • usr/lib/arb/bin/clustalv
  • usr/lib/arb/bin/count
  • usr/lib/arb/bin/count
  • usr/lib/arb/bin/findall
  • usr/lib/arb/bin/findall
  • usr/lib/arb/bin/lsadt
  • usr/lib/arb/bin/lsadt
  • usr/lib/arb/bin/sho_helix
  • usr/lib/arb/bin/sho_helix
  • usr/lib/arb/bin/varpos
  • usr/lib/arb/bin/varpos
• I hardening-no-fortify-functions
  • usr/lib/arb/bin/CAP2
  • usr/lib/arb/bin/CAP2
  • usr/lib/arb/bin/Restriction
  • usr/lib/arb/bin/Restriction
  • usr/lib/arb/bin/Zuk_to_gen
  • usr/lib/arb/bin/Zuk_to_gen
  • usr/lib/arb/bin/arb_a2ps
  • usr/lib/arb/bin/arb_a2ps
  • usr/lib/arb/bin/arb_treegen
  • usr/lib/arb/bin/arb_treegen
  • usr/lib/arb/bin/axml
  • usr/lib/arb/bin/axml
  • usr/lib/arb/bin/clustalv
  • usr/lib/arb/bin/clustalv
  • usr/lib/arb/bin/count
  • usr/lib/arb/bin/count
  • usr/lib/arb/bin/findall
  • usr/lib/arb/bin/findall
  • usr/lib/arb/bin/lsadt
  • usr/lib/arb/bin/lsadt
  • usr/lib/arb/bin/sho_helix
  • usr/lib/arb/bin/sho_helix
  • usr/lib/arb/bin/varpos
  • usr/lib/arb/bin/varpos
• I spelling-error-in-binary
  • usr/lib/arb/bin/arb_consensus_tree lengH length
  • usr/lib/arb/bin/arb_db_server doesnt doesn't
  • usr/lib/arb/bin/arb_db_server doesnt doesn't
  • usr/lib/arb/bin/arb_dist doesnt doesn't
  • usr/lib/arb/bin/arb_dist doesnt doesn't
  • usr/lib/arb/bin/arb_edit4 Wont Won't
  • usr/lib/arb/bin/arb_edit4 Wont Won't
  • usr/lib/arb/bin/arb_edit4 doesnt doesn't
  • usr/lib/arb/bin/arb_edit4 doesnt doesn't
  • usr/lib/arb/bin/arb_export_tree lengH length
  • usr/lib/arb/bin/arb_naligner aligne align
  • usr/lib/arb/bin/arb_naligner aligne align
  • usr/lib/arb/bin/arb_naligner doesnt doesn't
  • usr/lib/arb/bin/arb_naligner doesnt doesn't
  • usr/lib/arb/bin/arb_naligner enought enough
  • usr/lib/arb/bin/arb_naligner enought enough
  • usr/lib/arb/bin/arb_name_server doesnt doesn't
  • usr/lib/arb/bin/arb_name_server doesnt doesn't
  • usr/lib/arb/bin/arb_ntree Likelyhood Likelihood
  • usr/lib/arb/bin/arb_ntree Likelyhood Likelihood
  • usr/lib/arb/bin/arb_ntree Mor More
  • usr/lib/arb/bin/arb_ntree Mor More
  • usr/lib/arb/bin/arb_ntree doesnt doesn't
  • usr/lib/arb/bin/arb_ntree doesnt doesn't
  • usr/lib/arb/bin/arb_ntree lengH length
  • usr/lib/arb/bin/arb_ntree pres press
  • usr/lib/arb/bin/arb_pars doesnt doesn't
  • usr/lib/arb/bin/arb_pars doesnt doesn't
  • usr/lib/arb/bin/arb_probe doesnt doesn't
  • usr/lib/arb/bin/arb_probe doesnt doesn't
  • usr/lib/arb/bin/arb_pt_server doesnt doesn't
  • usr/lib/arb/bin/arb_pt_server doesnt doesn't
• I spelling-error-in-copyright
  • explicite explicit
  • explicite explicit
  • wont won't
  • wont won't

arb-common

• W duplicate-changelog-files
  • usr/share/doc/arb-common/arb_CHANGES.txt.gz usr/share/doc/arb-common/changelog.gz usr/share/doc/arb/arb_CHANGES.txt.gz
• X duplicate-files
  • usr/share/doc/arb-common/arb_LICENSE.txt.gz usr/share/doc/arb/arb_LICENSE.txt.gz
  • usr/share/doc/arb-common/arb_README.txt.gz usr/share/doc/arb/arb_README.txt.gz
  • usr/share/doc/arb-common/examples/demo.arb.gz usr/share/doc/arb/examples/demo.arb.gz
• I package-contains-documentation-outside-usr-share-doc
  • usr/lib/arb/PERL_SCRIPTS/BIOPERL/README
  • usr/lib/arb/SH/README
  • usr/share/arb/motifHack/README
• I spelling-error-in-copyright
  • explicite explicit
  • wont won't
• I unused-override
  • package-contains-timestamped-gzip usr/lib/arb/lib/help/*.gz

arb-doc

• I spelling-error-in-copyright
  • explicite explicit
  • wont won't

libarb

• I hardening-no-bindnow
  • usr/lib/arb/lib/ARB.so
  • usr/lib/arb/lib/ARB.so
  • usr/lib/arb/lib/libARBDB.so
  • usr/lib/arb/lib/libARBDB.so
  • usr/lib/arb/lib/libAWT.so
  • usr/lib/arb/lib/libAWT.so
  • usr/lib/arb/lib/libCORE.so
  • usr/lib/arb/lib/libCORE.so
  • usr/lib/arb/lib/libWINDOW.so
  • usr/lib/arb/lib/libWINDOW.so
• I spelling-error-in-binary
  • usr/lib/arb/lib/libARBDB.so colums columns
  • usr/lib/arb/lib/libARBDB.so colums columns
• I spelling-error-in-copyright
  • explicite explicit
  • explicite explicit
  • wont won't
  • wont won't

libarb-dev

• I spelling-error-in-binary
  • usr/lib/arb/SL/TREE_WRITE/TREE_WRITE.a lengH length
• I spelling-error-in-copyright
  • explicite explicit
  • explicite explicit
  • wont won't
  • wont won't

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing

arden

• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• X duplicate-files
  • usr/share/doc/arden/html/frames.html usr/share/doc/arden/html/index.html

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/

art-nextgen-simulation-tools

• I spelling-error-in-binary
  • usr/bin/art_454 unreconized unrecognized
  • usr/bin/art_454 unreconized unrecognized
  • usr/bin/art_SOLiD lenght length
  • usr/bin/art_SOLiD lenght length
  • usr/bin/art_SOLiD unreconized unrecognized
  • usr/bin/art_SOLiD unreconized unrecognized

art-nextgen-simulation-tools-profiles

• I package-contains-documentation-outside-usr-share-doc
  • usr/share/art-nextgen-simulation-tools/ART_profiler_454/README
  • usr/share/art-nextgen-simulation-tools/ART_profiler_illumina/README

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/

• P debian-watch-does-not-check-gpg-signature
• P no-dep5-copyright
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

artha

• X binary-file-built-without-LFS-support
  • usr/bin/artha
• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL
• P copyright-with-old-dh-make-debian-copyright
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/artha.desktop
  • usr/share/applications/artha.desktop

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://vina.scripps.edu/download.html
• P unversioned-copyright-format-uri
  • http://dep.debian.net/deps/dep5/

autodock-vina

• P debian-changelog-line-too-short
  • DEP5 (line 15)
  • DEP5 (line 15)
• I hardening-no-fortify-functions
  • usr/bin/vina
  • usr/bin/vina
• I spelling-error-in-binary
  • usr/bin/vina inconsisent inconsistent
  • usr/bin/vina inconsisent inconsistent

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://autodock.scripps.edu/downloads/autodock-registration/autodock-4-2-download-page/
• P file-contains-trailing-whitespace
  • debian/changelog (line 167)
  • debian/changelog (line 200)
  • debian/changelog (line 249)
  • debian/control (line 83)
  • debian/rules (line 69)
  • debian/rules (line 70)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-empty-directory
  • autodock/Tests/AutoDockTools/
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/autodocksuite.git
  • vcs-git https://anonscm.debian.org/git/debian-med/autodocksuite.git

autodock

• X binary-file-built-without-LFS-support
  • usr/bin/autodock4
• I hardening-no-bindnow
  • usr/bin/autodock4
  • usr/bin/autodock4
• X non-consecutive-debian-revision
  • 4.2.6-5 -> 4.2.6-3
  • 4.2.6-5 -> 4.2.6-3
• I spelling-error-in-binary
  • usr/bin/autodock4 conect connect
  • usr/bin/autodock4 conect connect
• I spelling-error-in-manpage
  • usr/share/man/man1/autodock4.1.gz perfoms performs
  • usr/share/man/man1/autodock4.1.gz perfoms performs
• I unused-override
  • spelling-error-in-binary usr/bin/autodock4 Ang And
  • spelling-error-in-binary usr/bin/autodock4 Ang And

autodock-getdata

• X non-consecutive-debian-revision
  • 4.2.6-5 -> 4.2.6-3

autodock-test

• X non-consecutive-debian-revision
  • 4.2.6-5 -> 4.2.6-3

autogrid

• X binary-file-built-without-LFS-support
  • usr/bin/autogrid4
• I hardening-no-bindnow
  • usr/bin/autogrid4
  • usr/bin/autogrid4
• X non-consecutive-debian-revision
  • 4.2.6-5 -> 4.2.6-3
  • 4.2.6-5 -> 4.2.6-3

autogrid-test

• X non-consecutive-debian-revision
  • 4.2.6-5 -> 4.2.6-3

• W changelog-should-mention-nmu
• W debian-rules-should-not-set-CFLAGS-from-noopt
• P debian-watch-does-not-check-gpg-signature
• P duplicate-in-relation-field
  • in source build-depends: dh-python, dh-python
• P file-contains-trailing-whitespace
  • debian/changelog (line 131)
  • debian/changelog (line 247)
  • debian/changelog (line 269)
  • debian/control (line 100)
  • debian/control (line 101)
  • debian/control (line 104)
  • debian/control (line 105)
  • debian/control (line 117)
  • debian/control (line 118)
  • debian/control (line 119)
  • debian/control (line 120)
  • debian/control (line 121)
  • debian/control (line 124)
  • debian/control (line 125)
  • debian/control (line 139)
  • debian/control (line 140)
  • debian/control (line 141)
  • debian/control (line 142)
  • debian/control (line 154)
  • debian/control (line 155)
  • debian/control (line 156)
  • debian/control (line 157)
  • debian/control (line 171)
  • debian/control (line 172)
  • debian/control (line 173)
  • debian/control (line 174)
  • debian/control (line 186)
  • debian/control (line 187)
  • debian/control (line 188)
  • debian/control (line 211)
  • debian/control (line 212)
  • debian/control (line 213)
  • debian/control (line 53)
  • debian/control (line 54)
  • debian/control (line 55)
  • debian/control (line 56)
  • debian/control (line 57)
  • debian/control (line 60)
  • debian/control (line 61)
  • debian/control (line 74)
  • debian/control (line 75)
  • debian/control (line 76)
  • debian/control (line 77)
  • debian/control (line 78)
  • debian/control (line 81)
  • debian/control (line 82)
  • debian/control (line 97)
  • debian/control (line 98)
  • debian/control (line 99)
  • debian/rules (line 1)
  • debian/rules (line 145)
  • debian/rules (line 158)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 9
• W python-foo-but-no-python3-foo
  • python-ball
  • python-ballview
• W source-nmu-has-incorrect-version-number
  • 1.4.3~beta1-3
• W spelling-error-in-patch-description
  • debian/patches/fix-PoseClustering_Test-replace-file-compare-with-deserialize.patch comparision comparison
  • debian/patches/link_against_x11.patch explicitely explicitly
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/ball.git
  • vcs-git https://anonscm.debian.org/git/debian-med/ball.git

ballview (1.4.3~beta1-3+b1; main)

• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/ballview.desktop
• W desktop-mime-but-no-exec-code
  • usr/share/applications/ballview.desktop
• I hardening-no-fortify-functions
  • usr/bin/BALLView
• I spelling-error-in-binary
  • usr/bin/BALLView dont don't
  • usr/bin/BALLView informations information
  • usr/bin/BALLView occured occurred

libball1.4 (1.4.3~beta1-3+b1; main)

• X binary-file-built-without-LFS-support
  • usr/lib/libBALL.so.1.4
• W dev-pkg-without-shlib-symlink
  • usr/lib/libBALL.so.1.4 usr/lib/libBALL.so
• I hardening-no-fortify-functions
  • usr/lib/libBALL.so.1.4
• I no-symbols-control-file
  • usr/lib/libBALL.so.1.4
• X shlib-calls-exit
  • usr/lib/libBALL.so.1.4
• I spelling-error-in-binary
  • usr/lib/libBALL.so.1.4 CONECT CONNECT
  • usr/lib/libBALL.so.1.4 childs children
  • usr/lib/libBALL.so.1.4 enought enough
  • usr/lib/libBALL.so.1.4 errorneous erroneous
  • usr/lib/libBALL.so.1.4 featues features
  • usr/lib/libBALL.so.1.4 implmented implemented
  • usr/lib/libBALL.so.1.4 intialization initialization
  • usr/lib/libBALL.so.1.4 occured occurred
  • usr/lib/libBALL.so.1.4 paramters parameters
  • usr/lib/libBALL.so.1.4 registerd registered
  • usr/lib/libBALL.so.1.4 seperator separator
  • usr/lib/libBALL.so.1.4 standart standard
  • usr/lib/libBALL.so.1.4 unkown unknown
  • usr/lib/libBALL.so.1.4 woNT won't

libball1.4-doc

• X duplicate-files
  • usr/share/doc/libball1.4/html/BALL/d0/d00/VIEW_2KERNEL_2kernel_8doc.html usr/share/doc/libball1.4/html/BALL/db/d6a/KERNEL_2kernel_8doc.html
  • usr/share/doc/libball1.4/html/BALL/d0/d85/COMMON_2common_8doc.html usr/share/doc/libball1.4/html/BALL/d0/ded/MOLMEC_2COMMON_2common_8doc.html
  • usr/share/doc/libball1.4/html/BALL/d2/dad/DATATYPE_2datatype_8doc.html usr/share/doc/libball1.4/html/BALL/d4/d2e/VIEW_2DATATYPE_2datatype_8doc.html
  • usr/share/doc/libball1.4/html/BALL/search/all_0.js usr/share/doc/libball1.4/html/BALL/search/groups_0.js
  • usr/share/doc/libball1.4/html/BALL/search/all_1.js usr/share/doc/libball1.4/html/BALL/search/defines_0.js
  • usr/share/doc/libball1.4/html/BALL/search/all_1c.js usr/share/doc/libball1.4/html/BALL/search/functions_1a.js

libballview1.4 (1.4.3~beta1-3+b1; main)

• W dev-pkg-without-shlib-symlink
  • usr/lib/libVIEW.so.1.4 usr/lib/libVIEW.so
• I hardening-no-fortify-functions
  • usr/lib/libVIEW.so.1.4
• I no-symbols-control-file
  • usr/lib/libVIEW.so.1.4
• O package-name-doesnt-match-sonames
  • libVIEW1.4
• I spelling-error-in-binary
  • usr/lib/libVIEW.so.1.4 Dont Don't
  • usr/lib/libVIEW.so.1.4 Informations Information
  • usr/lib/libVIEW.so.1.4 Uknown Unknown
  • usr/lib/libVIEW.so.1.4 an other another
  • usr/lib/libVIEW.so.1.4 beeing being
  • usr/lib/libVIEW.so.1.4 calulate calculate
  • usr/lib/libVIEW.so.1.4 choosen chosen
  • usr/lib/libVIEW.so.1.4 correspoding corresponding
  • usr/lib/libVIEW.so.1.4 doesnt doesn't
  • usr/lib/libVIEW.so.1.4 executeable executable
  • usr/lib/libVIEW.so.1.4 mininum minimum
  • usr/lib/libVIEW.so.1.4 occured occurred
  • usr/lib/libVIEW.so.1.4 orgin origin
  • usr/lib/libVIEW.so.1.4 reseting resetting
  • usr/lib/libVIEW.so.1.4 succesfully successfully
  • usr/lib/libVIEW.so.1.4 sucessfully successfully
  • usr/lib/libVIEW.so.1.4 unkown unknown

libballview1.4-dev (1.4.3~beta1-3+b1; main)

• I package-contains-documentation-outside-usr-share-doc
  • usr/include/BALL/VIEW/UIC/README
• O package-contains-empty-directory
  • usr/lib/

python-ball (1.4.3~beta1-3+b1; main)

• X binary-file-built-without-LFS-support
  • usr/lib/python2.7/dist-packages/BALLCore.i386-linux-gnu.so

• W debian-rules-should-not-set-CFLAGS-from-noopt
• P debian-watch-does-not-check-gpg-signature
• P duplicate-in-relation-field
  • in source build-depends: dh-python, dh-python
• P file-contains-trailing-whitespace
  • debian/changelog (line 146)
  • debian/changelog (line 262)
  • debian/changelog (line 284)
  • debian/control (line 100)
  • debian/control (line 101)
  • debian/control (line 104)
  • debian/control (line 105)
  • debian/control (line 117)
  • debian/control (line 118)
  • debian/control (line 119)
  • debian/control (line 120)
  • debian/control (line 121)
  • debian/control (line 124)
  • debian/control (line 125)
  • debian/control (line 139)
  • debian/control (line 140)
  • debian/control (line 141)
  • debian/control (line 142)
  • debian/control (line 154)
  • debian/control (line 155)
  • debian/control (line 156)
  • debian/control (line 157)
  • debian/control (line 171)
  • debian/control (line 172)
  • debian/control (line 173)
  • debian/control (line 174)
  • debian/control (line 186)
  • debian/control (line 187)
  • debian/control (line 188)
  • debian/control (line 211)
  • debian/control (line 212)
  • debian/control (line 213)
  • debian/control (line 53)
  • debian/control (line 54)
  • debian/control (line 55)
  • debian/control (line 56)
  • debian/control (line 57)
  • debian/control (line 60)
  • debian/control (line 61)
  • debian/control (line 74)
  • debian/control (line 75)
  • debian/control (line 76)
  • debian/control (line 77)
  • debian/control (line 78)
  • debian/control (line 81)
  • debian/control (line 82)
  • debian/control (line 97)
  • debian/control (line 98)
  • debian/control (line 99)
  • debian/rules (line 1)
  • debian/rules (line 145)
  • debian/rules (line 158)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• W python-foo-but-no-python3-foo
  • python-ball
  • python-ballview
• W spelling-error-in-patch-description
  • debian/patches/fix-PoseClustering_Test-replace-file-compare-with-deserialize.patch comparision comparison
  • debian/patches/link_against_x11.patch explicitely explicitly
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/ball.git
  • vcs-git https://anonscm.debian.org/git/debian-med/ball.git

ballview

• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/ballview.desktop
• W desktop-mime-but-no-exec-code
  • usr/share/applications/ballview.desktop
• I hardening-no-fortify-functions
  • usr/bin/BALLView
• I spelling-error-in-binary
  • usr/bin/BALLView dont don't
  • usr/bin/BALLView informations information
  • usr/bin/BALLView occured occurred
• W spelling-error-in-changelog
  • upsteam upstream

libball1.4

• W dev-pkg-without-shlib-symlink
  • usr/lib/libBALL.so.1.4 usr/lib/libBALL.so
• I hardening-no-fortify-functions
  • usr/lib/libBALL.so.1.4
• I no-symbols-control-file
  • usr/lib/libBALL.so.1.4
• X shlib-calls-exit
  • usr/lib/libBALL.so.1.4
• I spelling-error-in-binary
  • usr/lib/libBALL.so.1.4 CONECT CONNECT
  • usr/lib/libBALL.so.1.4 childs children
  • usr/lib/libBALL.so.1.4 enought enough
  • usr/lib/libBALL.so.1.4 errorneous erroneous
  • usr/lib/libBALL.so.1.4 featues features
  • usr/lib/libBALL.so.1.4 implmented implemented
  • usr/lib/libBALL.so.1.4 intialization initialization
  • usr/lib/libBALL.so.1.4 occured occurred
  • usr/lib/libBALL.so.1.4 paramters parameters
  • usr/lib/libBALL.so.1.4 registerd registered
  • usr/lib/libBALL.so.1.4 seperator separator
  • usr/lib/libBALL.so.1.4 standart standard
  • usr/lib/libBALL.so.1.4 unkown unknown
  • usr/lib/libBALL.so.1.4 woNT won't
• W spelling-error-in-changelog
  • upsteam upstream

libball1.4-data

• W spelling-error-in-changelog
  • upsteam upstream

libball1.4-dev

• W spelling-error-in-changelog
  • upsteam upstream

libball1.4-doc

• X duplicate-files
  • usr/share/doc/libball1.4/html/BALL/d0/d00/VIEW_2KERNEL_2kernel_8doc.html usr/share/doc/libball1.4/html/BALL/db/d6a/KERNEL_2kernel_8doc.html
  • usr/share/doc/libball1.4/html/BALL/d0/d85/COMMON_2common_8doc.html usr/share/doc/libball1.4/html/BALL/d0/ded/MOLMEC_2COMMON_2common_8doc.html
  • usr/share/doc/libball1.4/html/BALL/d2/dad/DATATYPE_2datatype_8doc.html usr/share/doc/libball1.4/html/BALL/d4/d2e/VIEW_2DATATYPE_2datatype_8doc.html
  • usr/share/doc/libball1.4/html/BALL/search/all_0.js usr/share/doc/libball1.4/html/BALL/search/groups_0.js
  • usr/share/doc/libball1.4/html/BALL/search/all_1.js usr/share/doc/libball1.4/html/BALL/search/defines_0.js
  • usr/share/doc/libball1.4/html/BALL/search/all_1c.js usr/share/doc/libball1.4/html/BALL/search/functions_1a.js
• W spelling-error-in-changelog
  • upsteam upstream

libballview1.4

• W dev-pkg-without-shlib-symlink
  • usr/lib/libVIEW.so.1.4 usr/lib/libVIEW.so
• I hardening-no-fortify-functions
  • usr/lib/libVIEW.so.1.4
• I no-symbols-control-file
  • usr/lib/libVIEW.so.1.4
• O package-name-doesnt-match-sonames
  • libVIEW1.4
• I spelling-error-in-binary
  • usr/lib/libVIEW.so.1.4 Dont Don't
  • usr/lib/libVIEW.so.1.4 Informations Information
  • usr/lib/libVIEW.so.1.4 Uknown Unknown
  • usr/lib/libVIEW.so.1.4 an other another
  • usr/lib/libVIEW.so.1.4 beeing being
  • usr/lib/libVIEW.so.1.4 calulate calculate
  • usr/lib/libVIEW.so.1.4 choosen chosen
  • usr/lib/libVIEW.so.1.4 correspoding corresponding
  • usr/lib/libVIEW.so.1.4 doesnt doesn't
  • usr/lib/libVIEW.so.1.4 executeable executable
  • usr/lib/libVIEW.so.1.4 mininum minimum
  • usr/lib/libVIEW.so.1.4 occured occurred
  • usr/lib/libVIEW.so.1.4 orgin origin
  • usr/lib/libVIEW.so.1.4 reseting resetting
  • usr/lib/libVIEW.so.1.4 succesfully successfully
  • usr/lib/libVIEW.so.1.4 sucessfully successfully
  • usr/lib/libVIEW.so.1.4 unkown unknown
• W spelling-error-in-changelog
  • upsteam upstream

libballview1.4-dev

• I package-contains-documentation-outside-usr-share-doc
  • usr/include/BALL/VIEW/UIC/README
• O package-contains-empty-directory
  • usr/lib/
• W spelling-error-in-changelog
  • upsteam upstream

python-ball

• W spelling-error-in-changelog
  • upsteam upstream

python-ballview

• W spelling-error-in-changelog
  • upsteam upstream

• P debian-watch-does-not-check-gpg-signature
• X deprecated-configure-filename
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

libbambamc0

• X binary-file-built-without-LFS-support
  • usr/lib/i386-linux-gnu/libbambamc.so.0.0.50
• I hardening-no-bindnow
  • usr/lib/i386-linux-gnu/libbambamc.so.0.0.50
  • usr/lib/x86_64-linux-gnu/libbambamc.so.0.0.50
• I no-symbols-control-file
  • usr/lib/i386-linux-gnu/libbambamc.so.0.0.50
  • usr/lib/x86_64-linux-gnu/libbambamc.so.0.0.50

• I debian-rules-contains-unnecessary-get-orig-source-target
• I debian-rules-parses-dpkg-parsechangelog
  • (line 4)
  • (line 41)
  • (line 42)
• W debian-rules-uses-unnecessary-dh-argument
  • dh ... --parallel (line 10)
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 4)
  • debian/changelog (line 6)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/bamtools.git
  • vcs-git https://anonscm.debian.org/git/debian-med/bamtools.git

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 39)
  • debian/changelog (line 41)

libbamtools-doc

• X duplicate-files
  • usr/share/doc/libbamtools-dev/html/search/all_10.js usr/share/doc/libbamtools-dev/html/search/variables_d.js
  • usr/share/doc/libbamtools-dev/html/search/all_15.js usr/share/doc/libbamtools-dev/html/search/variables_12.js
  • usr/share/doc/libbamtools-dev/html/search/all_17.js usr/share/doc/libbamtools-dev/html/search/variables_13.js
  • usr/share/doc/libbamtools-dev/html/search/all_18.js usr/share/doc/libbamtools-dev/html/search/functions_12.js
  • usr/share/doc/libbamtools-dev/html/search/all_4.js usr/share/doc/libbamtools-dev/html/search/functions_3.js
  • usr/share/doc/libbamtools-dev/html/search/all_7.js usr/share/doc/libbamtools-dev/html/search/functions_6.js
  • usr/share/doc/libbamtools-dev/html/search/all_9.js usr/share/doc/libbamtools-dev/html/search/functions_8.js
  • usr/share/doc/libbamtools-dev/html/search/all_a.js usr/share/doc/libbamtools-dev/html/search/variables_7.js

libbamtools2.5.1

• I no-symbols-control-file
  • usr/lib/i386-linux-gnu/libbamtools.so.2.5.1
  • usr/lib/x86_64-linux-gnu/libbamtools.so.2.5.1
• X shlib-calls-exit
  • usr/lib/i386-linux-gnu/libbamtools.so.2.5.1
  • usr/lib/x86_64-linux-gnu/libbamtools.so.2.5.1

• P debian-watch-does-not-check-gpg-signature
• P source-contains-empty-directory
  • src/cimg/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/beads.git
  • vcs-git https://anonscm.debian.org/git/debian-med/beads.git

beads

• X binary-file-built-without-LFS-support
  • usr/bin/beads
  • usr/bin/qtbeads
• W binary-without-manpage
  • usr/bin/qtbeads
  • usr/bin/qtbeads
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/beads.desktop
  • usr/share/applications/beads.desktop
• I spelling-error-in-binary
  • usr/bin/beads assignement assignment
  • usr/bin/beads assignement assignment
  • usr/bin/qtbeads assignement assignment
  • usr/bin/qtbeads assignement assignment
  • usr/bin/qtbeads developped developed
  • usr/bin/qtbeads developped developed
  • usr/bin/qtbeads occured occurred
  • usr/bin/qtbeads occured occurred

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/control (line 103)
  • debian/control (line 104)
  • debian/control (line 106)
  • debian/control (line 107)
  • debian/control (line 108)
  • debian/control (line 109)
  • debian/control (line 110)
  • debian/control (line 45)
  • debian/control (line 46)
  • debian/control (line 48)
  • debian/control (line 49)
  • debian/control (line 50)
  • debian/control (line 51)
  • debian/control (line 52)
  • debian/control (line 64)
  • debian/control (line 65)
  • debian/control (line 67)
  • debian/control (line 68)
  • debian/control (line 69)
  • debian/control (line 70)
  • debian/control (line 71)
  • debian/control (line 84)
  • debian/control (line 85)
  • debian/control (line 87)
  • debian/control (line 88)
  • debian/control (line 89)
  • debian/control (line 90)
  • debian/control (line 91)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P source-contains-empty-directory
  • lib/
  • release/Linux/lib/
  • release_phylogeography/common/lib/
• I testsuite-autopkgtest-missing

beast-mcmc

• W binary-without-manpage
  • usr/bin/beast-tracer
  • usr/bin/loganalyser
  • usr/bin/logcombiner
  • usr/bin/treeannotator
  • usr/bin/treestat

beast-mcmc-doc

• I possible-documentation-but-no-doc-base-registration

beast-mcmc-examples

• X duplicate-files
  • usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/freqs_zs.csv usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/pcadata/freqs.csv
  • usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/inirates.csv.gz usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/rates_zs.csv.gz

libnucleotidelikelihoodcore0

• I hardening-no-bindnow
  • usr/lib/libNucleotideLikelihoodCore.so.0
  • usr/lib/libNucleotideLikelihoodCore.so.0
• I no-symbols-control-file
  • usr/lib/libNucleotideLikelihoodCore.so.0
  • usr/lib/libNucleotideLikelihoodCore.so.0

libnucleotidelikelihoodcore0-dbgsym

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/80/b24c2b87bfd56a5b0dc5540627bbf59ceb1beb.debug
  • usr/lib/debug/.build-id/a5/6d36e425b496b7bf79ab85f9d6c96cb21e0c90.debug

• I debian-rules-parses-dpkg-parsechangelog
  • (line 9)
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/control (line 34)
  • debian/control (line 35)
  • debian/control (line 37)
  • debian/control (line 38)
  • debian/control (line 39)
  • debian/control (line 40)
  • debian/control (line 41)
  • debian/control (line 54)
  • debian/control (line 55)
  • debian/control (line 57)
  • debian/control (line 58)
  • debian/control (line 59)
  • debian/control (line 60)
  • debian/control (line 61)
  • debian/control (line 73)
  • debian/control (line 74)
  • debian/control (line 76)
  • debian/control (line 77)
  • debian/control (line 78)
  • debian/control (line 79)
  • debian/control (line 80)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-empty-directory
  • lib/bundler/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/beast2-mcmc.git
  • vcs-git https://anonscm.debian.org/git/debian-med/beast2-mcmc.git

beast2-mcmc-doc

• I possible-documentation-but-no-doc-base-registration

beast2-mcmc-examples

• X duplicate-files
  • usr/share/doc/beast-mcmc/examples/nexus/26.nex.gz usr/share/doc/beast-mcmc/examples/nexus/gopher.nex.gz

• I debian-rules-contains-unnecessary-get-orig-source-target
• I debian-rules-parses-dpkg-parsechangelog
  • (line 7)
  • (line 8)
• P debian-watch-does-not-check-gpg-signature
• W dep5-copyright-license-name-not-unique
  • (paragraph at line 100)
  • mit (paragraph at line 28)
• W dep5-file-paragraph-references-header-paragraph
  • gpl-2 (paragraph at line 22)
• P file-contains-trailing-whitespace
  • debian/changelog (line 23)
  • debian/rules (line 43)
• I out-of-date-standards-version
  • 3.9.8 (released 2016-04-06) (current is 4.2.1)
• P package-uses-old-debhelper-compat-version
  • 10
• I unused-license-paragraph-in-dep5-copyright
  • gpl-3+ (paragraph at line 100)
  • mit (paragraph at line 100)
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/bedtools.git
  • vcs-git https://anonscm.debian.org/git/debian-med/bedtools.git

bedtools

• W binary-without-manpage
  • usr/bin/annotateBed
  • usr/bin/bamToBed
  • usr/bin/bamToFastq
  • usr/bin/bed12ToBed6
  • usr/bin/bedToBam
  • usr/bin/bedToIgv
  • usr/bin/bedpeToBam
  • usr/bin/bedtools
  • usr/bin/closestBed
  • usr/bin/clusterBed
  • usr/bin/complementBed
  • usr/bin/coverageBed
  • usr/bin/expandCols
  • usr/bin/fastaFromBed
  • usr/bin/flankBed
  • usr/bin/genomeCoverageBed
  • usr/bin/getOverlap
  • usr/bin/groupBy
  • usr/bin/intersectBed
  • usr/bin/linksBed
  • usr/bin/mapBed
  • usr/bin/maskFastaFromBed
  • usr/bin/mergeBed
  • usr/bin/multiBamCov
  • usr/bin/multiIntersectBed
  • usr/bin/nucBed
  • usr/bin/pairToBed
  • usr/bin/pairToPair
  • usr/bin/randomBed
  • usr/bin/shiftBed
  • usr/bin/shuffleBed
  • usr/bin/slopBed
  • usr/bin/sortBed
  • usr/bin/subtractBed
  • usr/bin/tagBam
  • usr/bin/unionBedGraphs
  • usr/bin/windowBed
  • usr/bin/windowMaker
• I spelling-error-in-binary
  • usr/bin/bedtools postive positive

bedtools-dbgsym

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/16/d99793d5cd655de9bbcb393f482abb96d0a419.debug

bedtools-test

• W executable-not-elf-or-script
  • usr/share/bedtools/data/knownGene.hg18.chr21.bed
• I package-contains-documentation-outside-usr-share-doc
  • usr/share/bedtools/test/fisher/README.md
• W script-not-executable
  • usr/share/bedtools/test/bamtobed/test-bamtobed.sh
  • usr/share/bedtools/test/bed12tobed6/test-bed12tobed6.sh
  • usr/share/bedtools/test/closest/kclosest/test-kclosest.sh
  • usr/share/bedtools/test/closest/sortAndNaming/test-sort-and-naming.sh
  • usr/share/bedtools/test/closest/test-closest.sh
  • usr/share/bedtools/test/cluster/test-cluster.sh
  • usr/share/bedtools/test/complement/test-complement.sh
  • usr/share/bedtools/test/coverage/test-coverage.sh
  • usr/share/bedtools/test/expand/test-expand.sh
  • usr/share/bedtools/test/fisher/cmp.sh
  • usr/share/bedtools/test/fisher/get.sh
  • usr/share/bedtools/test/fisher/shuf.sh
  • usr/share/bedtools/test/fisher/test-fisher.sh
  • usr/share/bedtools/test/flank/test-flank.sh
  • usr/share/bedtools/test/general/test-general.sh
  • usr/share/bedtools/test/getfasta/test-getfasta.sh
  • usr/share/bedtools/test/groupBy/test-groupby.sh
  • usr/share/bedtools/test/intersect/multi_intersect/test-multi_intersect.sh
  • usr/share/bedtools/test/intersect/sortAndNaming/test-sort-and-naming.sh
  • usr/share/bedtools/test/intersect/test-intersect.sh
  • usr/share/bedtools/test/jaccard/test-jaccard.sh
  • usr/share/bedtools/test/makewindows/test-makewindows.sh
  • usr/share/bedtools/test/map/test-map.sh
  • usr/share/bedtools/test/merge/test-merge.sh
  • usr/share/bedtools/test/multicov/test-multicov.sh
  • usr/share/bedtools/test/reldist/test-reldist.sh
  • usr/share/bedtools/test/sample/test-sample.sh
  • usr/share/bedtools/test/shift/test-shift.sh
  • usr/share/bedtools/test/shuffle/test-shuffle.sh
  • usr/share/bedtools/test/slop/test-slop.sh
  • usr/share/bedtools/test/sort/test-sort.sh
  • usr/share/bedtools/test/spacing/test-spacing.sh
  • usr/share/bedtools/test/split/test-split.sh
  • usr/share/bedtools/test/subtract/test-subtract.sh
  • usr/share/bedtools/test/test.sh

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 49)

bedtools

• W binary-without-manpage
  • usr/bin/annotateBed
  • usr/bin/bamToBed
  • usr/bin/bamToFastq
  • usr/bin/bed12ToBed6
  • usr/bin/bedToBam
  • usr/bin/bedToIgv
  • usr/bin/bedpeToBam
  • usr/bin/bedtools
  • usr/bin/closestBed
  • usr/bin/clusterBed
  • usr/bin/complementBed
  • usr/bin/coverageBed
  • usr/bin/expandCols
  • usr/bin/fastaFromBed
  • usr/bin/flankBed
  • usr/bin/genomeCoverageBed
  • usr/bin/getOverlap
  • usr/bin/groupBy
  • usr/bin/intersectBed
  • usr/bin/linksBed
  • usr/bin/mapBed
  • usr/bin/maskFastaFromBed
  • usr/bin/mergeBed
  • usr/bin/multiBamCov
  • usr/bin/multiIntersectBed
  • usr/bin/nucBed
  • usr/bin/pairToBed
  • usr/bin/pairToPair
  • usr/bin/randomBed
  • usr/bin/shiftBed
  • usr/bin/shuffleBed
  • usr/bin/slopBed
  • usr/bin/sortBed
  • usr/bin/subtractBed
  • usr/bin/tagBam
  • usr/bin/unionBedGraphs
  • usr/bin/windowBed
  • usr/bin/windowMaker
• I spelling-error-in-binary
  • usr/bin/bedtools postive positive

bedtools-dbgsym

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/80/ff25dec4eb06f32356c685e18a4efc19d49099.debug

bedtools-test

• W executable-not-elf-or-script
  • usr/share/bedtools/data/knownGene.hg18.chr21.bed
  • usr/share/bedtools/test/sort/b.bed
• I package-contains-documentation-outside-usr-share-doc
  • usr/share/bedtools/test/fisher/README.md
• W script-not-executable
  • usr/share/bedtools/test/bamtobed/test-bamtobed.sh
  • usr/share/bedtools/test/bed12tobed6/test-bed12tobed6.sh
  • usr/share/bedtools/test/closest/kclosest/test-kclosest.sh
  • usr/share/bedtools/test/closest/sortAndNaming/test-sort-and-naming.sh
  • usr/share/bedtools/test/closest/test-closest.sh
  • usr/share/bedtools/test/cluster/test-cluster.sh
  • usr/share/bedtools/test/complement/test-complement.sh
  • usr/share/bedtools/test/expand/test-expand.sh
  • usr/share/bedtools/test/fisher/cmp.sh
  • usr/share/bedtools/test/fisher/get.sh
  • usr/share/bedtools/test/fisher/shuf.sh
  • usr/share/bedtools/test/fisher/test-fisher.sh
  • usr/share/bedtools/test/flank/test-flank.sh
  • usr/share/bedtools/test/general/test-general.sh
  • usr/share/bedtools/test/getfasta/test-getfasta.sh
  • usr/share/bedtools/test/groupby/test-groupby.sh
  • usr/share/bedtools/test/intersect/multi_intersect/test-multi_intersect.sh
  • usr/share/bedtools/test/intersect/sortAndNaming/test-sort-and-naming.sh
  • usr/share/bedtools/test/intersect/test-intersect.sh
  • usr/share/bedtools/test/jaccard/test-jaccard.sh
  • usr/share/bedtools/test/makewindows/test-makewindows.sh
  • usr/share/bedtools/test/map/test-map.sh
  • usr/share/bedtools/test/merge/test-merge.sh
  • usr/share/bedtools/test/multicov/test-multicov.sh
  • usr/share/bedtools/test/negativecontrol/test-negativecontrol.sh
  • usr/share/bedtools/test/reldist/test-reldist.sh
  • usr/share/bedtools/test/sample/test-sample.sh
  • usr/share/bedtools/test/shift/test-shift.sh
  • usr/share/bedtools/test/shuffle/test-shuffle.sh
  • usr/share/bedtools/test/slop/test-slop.sh
  • usr/share/bedtools/test/sort/test-sort.sh
  • usr/share/bedtools/test/spacing/test-spacing.sh
  • usr/share/bedtools/test/split/test-split.sh
  • usr/share/bedtools/test/subtract/test-subtract.sh

• P debian-watch-does-not-check-gpg-signature
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/bio-tradis.git
  • vcs-git https://anonscm.debian.org/git/debian-med/bio-tradis.git

bio-tradis

• X application-in-library-section
  • perl usr/bin/add_tradis_tags usr/bin/bacteria_tradis usr/bin/check_tradis_tags usr/bin/combine_tradis_plots usr/bin/filter_tradis_tags usr/bin/remove_tradis_tags usr/bin/tradis_comparison usr/bin/tradis_essentiality usr/bin/tradis_gene_insert_sites usr/bin/tradis_merge_plots usr/bin/tradis_plot
• E wrong-path-for-interpreter
  • usr/bin/add_tradis_tags (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/bacteria_tradis (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/check_tradis_tags (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/combine_tradis_plots (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/filter_tradis_tags (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/remove_tradis_tags (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/tradis_gene_insert_sites (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/tradis_merge_plots (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/tradis_plot (#!/usr/bin/env perl != /usr/bin/perl)

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://www.bioinformatics.org/biococoa/downloads/
• P file-contains-trailing-whitespace
  • debian/changelog (line 75)
• P no-dep5-copyright
• P package-does-not-use-debhelper-or-cdbs
• P source-contains-empty-directory
  • BCAppKit/2.0-cleanup/
  • BCFoundation/2.0-cleanup/
  • BCFoundation/Tests/TestFiles/
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/biococoa.git
  • vcs-git https://anonscm.debian.org/git/debian-med/biococoa.git

libbiococoa-dev (2.2.2-3+b1; main)

• I possible-documentation-but-no-doc-base-registration

libbiococoa2 (2.2.2-3+b1; main)

• X binary-file-built-without-LFS-support
  • usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2
• I hardening-no-bindnow
  • usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2
  • usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2
• X shlib-calls-exit
  • usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2
  • usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2

libbiococoa2-dbgsym (2.2.2-3+b1; main)

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/af/68f7db54523d0fb047772bdbb1255d77559e43.debug
  • usr/lib/debug/.build-id/d6/625b4946e0905e34b4bfa82e9780db7c7b2409.debug

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 26)
  • debian/changelog (line 45)
  • debian/rules (line 20)
  • debian/rules (line 36)
• P source-contains-empty-directory
  • reports/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/biojava-live.git
  • vcs-git https://anonscm.debian.org/git/debian-med/biojava-live.git

libbiojava-java

• I javalib-but-no-public-jars
• I possible-documentation-but-no-doc-base-registration

libbiojava-java-demos

• X duplicate-files
  • usr/share/doc/libbiojava-java-demos/examples/dp/fake.fasta.gz usr/share/doc/libbiojava-java-demos/examples/files/fake.fasta.gz
  • usr/share/doc/libbiojava-java-demos/examples/dp/fakepromoter.xml.gz usr/share/doc/libbiojava-java-demos/examples/files/fakepromoter.xml.gz
  • usr/share/doc/libbiojava-java-demos/examples/files/AL121903.embl.gz usr/share/doc/libbiojava-java-demos/examples/gff/AL121903.embl.gz usr/share/doc/libbiojava-java-demos/examples/seq/AL121903.embl.gz
  • usr/share/doc/libbiojava-java-demos/examples/files/AL121903.genbank.gz usr/share/doc/libbiojava-java-demos/examples/seq/AL121903.genbank.gz
  • usr/share/doc/libbiojava-java-demos/examples/files/varC4-2.gff.gz usr/share/doc/libbiojava-java-demos/examples/gff/varC4-2.gff.gz

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 115)
  • debian/changelog (line 124)
  • debian/changelog (line 142)
  • debian/changelog (line 268)
  • debian/changelog (line 406)
  • debian/changelog (line 90)
  • debian/rules (line 25)
• W obsolete-url-in-packaging
  • debian/copyright http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.923.tar.gz
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/git/debian-med/bioperl.git
  • vcs-git https://anonscm.debian.org/git/debian-med/bioperl.git

bioperl

• W binary-without-manpage
  • usr/bin/bp_das_server
  • usr/bin/bp_seqfeature_delete
  • usr/bin/bp_seqfeature_gff3
• E wrong-path-for-interpreter
  • usr/bin/bp_find-blast-matches (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/bp_seqcut (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/bp_seqfeature_gff3 (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/bp_seqpart (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/doc/bioperl/examples/root/exceptions3.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/doc/bioperl/examples/root/exceptions4.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/doc/bioperl/examples/searchio/custom_writer.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/doc/bioperl/examples/searchio/hspwriter.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/doc/bioperl/examples/searchio/rawwriter.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/doc/bioperl/examples/tools/seq_pattern.pl (#!/usr/bin/env perl != /usr/bin/perl)

libbio-perl-perl

• W manpage-has-bad-whatis-entry
  • usr/share/man/man3/Bio::Root::Build.3pm.gz
  • usr/share/man/man3/Bio::Root::Exception.3pm.gz
  • usr/share/man/man3/Bio::Root::IO.3pm.gz
  • usr/share/man/man3/Bio::Root::Root.3pm.gz
  • usr/share/man/man3/Bio::Root::RootI.3pm.gz
  • usr/share/man/man3/Bio::Root::Storable.3pm.gz
  • usr/share/man/man3/Bio::Root::Test.3pm.gz
  • usr/share/man/man3/Bio::Root::Utilities.3pm.gz
  • usr/share/man/man3/Bio::Root::Version.3pm.gz
  • usr/share/man/man3/Bio::SearchIO::hmmer3.3pm.gz
  • usr/share/man/man3/Bio::Tools::SeqPattern::Backtranslate.3pm.gz
  • usr/share/man/man3/Bio::TreeIO::NewickParser.3pm.gz
  • usr/share/man/man3/Bio::TreeIO::newick.3pm.gz
• W manpage-has-errors-from-man
  • usr/share/man/man3/Bio::SeqIO::bsml.3pm.gz 357: warning [p 4, 0.2i]: can't break line
• X perl-module-name-not-mentioned-in-description
  • Bio::Perl
• I spelling-error-in-manpage
  • usr/share/man/man3/Bio::LiveSeq::AARange.3pm.gz everytime every time
  • usr/share/man/man3/Bio::PhyloNetwork::muVector.3pm.gz substract subtract
  • usr/share/man/man3/Bio::PopGen::HtSNP.3pm.gz happend happened
  • usr/share/man/man3/Bio::Seq::LargeSeqI.3pm.gz resetable resettable
  • usr/share/man/man3/Bio::Structure::Entry.3pm.gz Conect Connect
  • usr/share/man/man3/Bio::Structure::Entry.3pm.gz conect connect
  • usr/share/man/man3/Bio::Structure::Entry.3pm.gz conect connect
  • usr/share/man/man3/Bio::Structure::Entry.3pm.gz conect connect
  • usr/share/man/man3/Bio::Structure::Entry.3pm.gz conect connect
  • usr/share/man/man3/Bio::Tools::Analysis::Protein::ELM.3pm.gz concensus consensus

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 108)
  • debian/changelog (line 156)
• X libmodule-build-perl-needs-to-be-in-build-depends
• X upstream-metadata-file-is-missing

bioperl-run

• O script-with-language-extension
  • usr/bin/bp_bioperl_application_installer.pl
  • usr/bin/bp_multi_hmmsearch.pl
  • usr/bin/bp_panalysis.pl
  • usr/bin/bp_papplmaker.pl
  • usr/bin/bp_run_neighbor.pl
  • usr/bin/bp_run_protdist.pl

libbio-perl-run-perl

• I extended-description-is-probably-too-short
• W manpage-has-bad-whatis-entry
  • usr/share/man/man3/Bio::Tools::Run::Alignment::Blat.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Alignment::Exonerate.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Phylo::FastTree.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::PhylipConf.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Raxml.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Primate.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Prints.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Profile.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Signalp.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::TribeMCL.3pm.gz
  • usr/share/man/man3/Bio::Tools::Run::Vista.3pm.gz
• W manpage-has-errors-from-pod2man
  • usr/share/man/man3/Bio::DB::SoapEUtilities::Result.3pm.gz:415
  • usr/share/man/man3/Bio::Tools::Run::ERPIN.3pm.gz:317
• I spelling-error-in-manpage
  • usr/share/man/man3/Bio::Tools::Run::Alignment::Exonerate.3pm.gz arugment argument
  • usr/share/man/man3/Bio::Tools::Run::Analysis::soap.3pm.gz allows to allows one to
  • usr/share/man/man3/Bio::Tools::Run::BWA.3pm.gz contruction construction
  • usr/share/man/man3/Bio::Tools::Run::EMBOSSacd.3pm.gz argment argument
  • usr/share/man/man3/Bio::Tools::Run::EMBOSSacd.3pm.gz retrive retrieve
  • usr/share/man/man3/Bio::Tools::Run::Hmmer.3pm.gz specifiy specify
  • usr/share/man/man3/Bio::Tools::Run::Maq.3pm.gz contruction construction
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phast::PhyloFit.3pm.gz flexability flexibility
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::Neighbor.3pm.gz orgininal original
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::ProtDist.3pm.gz orgininal original
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::ProtPars.3pm.gz documetation documentation
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::ProtPars.3pm.gz orgininal original
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::SeqBoot.3pm.gz bootstap bootstrap
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::SeqBoot.3pm.gz orginal original
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phylip::SeqBoot.3pm.gz orgininal original
  • usr/share/man/man3/Bio::Tools::Run::Phylo::PhyloBase.3pm.gz desribe describe
  • usr/share/man/man3/Bio::Tools::Run::Phylo::PhyloBase.3pm.gz desribe describe
  • usr/share/man/man3/Bio::Tools::Run::Phylo::Phyml.3pm.gz explicitely explicitly
  • usr/share/man/man3/Bio::Tools::Run::StandAloneBlastPlus.3pm.gz exeception exception
  • usr/share/man/man3/Bio::Tools::Run::WrapperBase::CommandExts.3pm.gz contruction construction

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://eddylab.org/software/squid/
• P file-contains-trailing-whitespace
  • debian/changelog (line 127)
  • debian/changelog (line 36)
  • debian/changelog (line 38)
  • debian/changelog (line 39)
  • debian/changelog (line 41)
  • debian/changelog (line 42)
  • debian/changelog (line 44)
  • debian/changelog (line 45)
  • debian/changelog (line 46)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P source-contains-empty-directory
  • Scripts/
  • Shiva/

biosquid

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL
• I hardening-no-fortify-functions
  • usr/bin/revcomp
  • usr/bin/revcomp

libsquid-dev

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL

libsquid1

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL
• I no-symbols-control-file
  • usr/lib/i386-linux-gnu/libsquid.so.1.0.0
  • usr/lib/x86_64-linux-gnu/libsquid.so.1.0.0
• X shlib-calls-exit
  • usr/lib/i386-linux-gnu/libsquid.so.1.0.0
  • usr/lib/x86_64-linux-gnu/libsquid.so.1.0.0

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/rules (line 83)
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/bitseq.git
  • vcs-git https://anonscm.debian.org/git/debian-med/bitseq.git

bitseq

• W binary-without-manpage
  • usr/bin/biocUpdate
  • usr/bin/biocUpdate
  • usr/bin/checkTR
  • usr/bin/checkTR
• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/LGPL
  • usr/share/common-licenses/LGPL
• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
  • (Depends: python)

• I testsuite-autopkgtest-missing

blends-common

• O executable-menu-file
  • usr/share/menu/blend-menu 0755
• E missing-depends-on-sensible-utils
  • usr/share/menu/blend-menu
• O postinst-does-not-call-updatemenus
  • usr/share/menu/blend-menu

blends-dev

• O binary-package-depends-on-toolchain-package
  • depends: debhelper (>= 9)

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • ftp://ftp.ncbi.nih.gov/repository/blocks/unix/blimps/blimps-([0-9.]+)\.tar\.gz
• I out-of-date-standards-version
  • 4.1.1 (released 2017-09-27) (current is 4.2.1)
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-prebuilt-binary
  • bin/Linux/LAMA
  • bin/Linux/LAMA_search
  • bin/Linux/addseqs
  • bin/Linux/biassed_blocks_finder
  • bin/Linux/blalign
  • bin/Linux/blastdat
  • bin/Linux/bldist
  • bin/Linux/blimps
  • bin/Linux/blk2mot
  • bin/Linux/blk2pssm
  • bin/Linux/blk2slx
  • bin/Linux/blkprob
  • bin/Linux/blksort
  • bin/Linux/block_vis
  • bin/Linux/blocks_search
  • bin/Linux/blosum
  • bin/Linux/blweight
  • bin/Linux/cobbler
  • bin/Linux/codehop
  • bin/Linux/coduse
  • bin/Linux/fastaseqs
  • bin/Linux/find_biassed_blocks
  • bin/Linux/format_block
  • bin/Linux/getblock
  • bin/Linux/getseq
  • bin/Linux/htmlize-LAMA
  • bin/Linux/htmlize-codehop
  • bin/Linux/interpro
  • bin/Linux/lisblk
  • bin/Linux/mablock
  • bin/Linux/makeblockmap
  • bin/Linux/makelis
  • bin/Linux/makelogob
  • bin/Linux/matrix_logob
  • bin/Linux/motifj
  • bin/Linux/motomat
  • bin/Linux/multimat
  • bin/Linux/narrow
  • bin/Linux/oligo_melt
  • bin/Linux/papssm
  • bin/Linux/prints2blocks
  • bin/Linux/pssmBL
  • bin/Linux/pssmdist
  • bin/Linux/rank_matrix
  • bin/Linux/retblock
  • bin/Linux/show_aligned_blocks
  • bin/Linux/uextract
  • bin/Sun_intel/LAMA
  • bin/Sun_intel/LAMA_search
  • bin/Sun_intel/addseqs
  • bin/Sun_intel/biassed_blocks_finder
  • bin/Sun_intel/blalign
  • bin/Sun_intel/blastdat
  • bin/Sun_intel/bldist
  • bin/Sun_intel/blimps
  • bin/Sun_intel/blk2mot
  • bin/Sun_intel/blk2pssm
  • bin/Sun_intel/blk2slx
  • bin/Sun_intel/blkprob
  • bin/Sun_intel/blksort
  • bin/Sun_intel/block_vis
  • bin/Sun_intel/blocks_search
  • bin/Sun_intel/blosum
  • bin/Sun_intel/blweight
  • bin/Sun_intel/cobbler
  • bin/Sun_intel/codehop
  • bin/Sun_intel/coduse
  • bin/Sun_intel/fastaseqs
  • bin/Sun_intel/find_biassed_blocks
  • bin/Sun_intel/format_block
  • bin/Sun_intel/getblock
  • bin/Sun_intel/getseq
  • bin/Sun_intel/htmlize-LAMA
  • bin/Sun_intel/htmlize-codehop
  • bin/Sun_intel/interpro
  • bin/Sun_intel/lisblk
  • bin/Sun_intel/mablock
  • bin/Sun_intel/makeblockmap
  • bin/Sun_intel/makelis
  • bin/Sun_intel/makelogob
  • bin/Sun_intel/matrix_logob
  • bin/Sun_intel/motifj
  • bin/Sun_intel/motomat
  • bin/Sun_intel/multimat
  • bin/Sun_intel/narrow
  • bin/Sun_intel/oligo_melt
  • bin/Sun_intel/papssm
  • bin/Sun_intel/prints2blocks
  • bin/Sun_intel/pssmBL
  • bin/Sun_intel/pssmdist
  • bin/Sun_intel/rank_matrix
  • bin/Sun_intel/retblock
  • bin/Sun_intel/show_aligned_blocks
  • bin/Sun_intel/uextract
  • bin/Sun_sparc/LAMA
  • bin/Sun_sparc/LAMA_search
  • bin/Sun_sparc/addseqs
  • bin/Sun_sparc/biassed_blocks_finder
  • bin/Sun_sparc/blalign
  • bin/Sun_sparc/blastdat
  • bin/Sun_sparc/bldist
  • bin/Sun_sparc/blimps
  • bin/Sun_sparc/blk2lis
  • bin/Sun_sparc/blk2mot
  • bin/Sun_sparc/blk2pssm
  • bin/Sun_sparc/blk2slx
  • bin/Sun_sparc/blkprob
  • bin/Sun_sparc/blksort
  • bin/Sun_sparc/block_vis
  • bin/Sun_sparc/blocks_search
  • bin/Sun_sparc/blosum
  • bin/Sun_sparc/blweight
  • bin/Sun_sparc/cobbler
  • bin/Sun_sparc/codehop
  • bin/Sun_sparc/coduse
  • bin/Sun_sparc/fastaseqs
  • bin/Sun_sparc/find_biassed_blocks
  • bin/Sun_sparc/format_block
  • bin/Sun_sparc/getblock
  • bin/Sun_sparc/getseq
  • bin/Sun_sparc/htmlize-LAMA
  • bin/Sun_sparc/htmlize-codehop
  • bin/Sun_sparc/interpro
  • bin/Sun_sparc/lisblk
  • bin/Sun_sparc/lislis
  • bin/Sun_sparc/mablock
  • bin/Sun_sparc/makeblockmap
  • bin/Sun_sparc/makelis
  • bin/Sun_sparc/makelogob
  • bin/Sun_sparc/matrix_logob
  • bin/Sun_sparc/motifj
  • bin/Sun_sparc/motmisc.o
  • bin/Sun_sparc/motomat
  • bin/Sun_sparc/multimat
  • bin/Sun_sparc/narrow
  • bin/Sun_sparc/oligo_melt
  • bin/Sun_sparc/papssm
  • bin/Sun_sparc/prints2blocks
  • bin/Sun_sparc/protxblk
  • bin/Sun_sparc/pssmBL
  • bin/Sun_sparc/pssmdist
  • bin/Sun_sparc/rank_matrix
  • bin/Sun_sparc/retblock
  • bin/Sun_sparc/show_aligned_blocks
  • bin/Sun_sparc/uextract
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/blimps.git
  • vcs-git https://anonscm.debian.org/git/debian-med/blimps.git

blimps-examples

• X duplicate-files
  • usr/share/doc/blimps-examples/examples/processor/distribution/fasta.in.seqs usr/share/doc/blimps-examples/examples/processor/distribution/stockholm.in.seqs
• X package-contains-no-arch-dependent-files

blimps-utils

• X duplicate-files
  • usr/share/doc/blimps-utils/html/biased_blocks.html usr/share/doc/blimps-utils/html/biassed_blocks.html
• I hardening-no-bindnow
  • usr/bin/fastaseqs
• W privacy-breach-generic
  • usr/share/doc/blimps-utils/html/thanks.html [<img src="http://www.nigms.nih.gov/nigms.nih.gov/images/banner_nigms.gif" height="45" width="300">] (http://www.nigms.nih.gov/nigms.nih.gov/images/banner_nigms.gif)
• W zero-byte-file-in-doc-directory
  • usr/share/doc/blimps-utils/html/bin/marks
  • usr/share/doc/blimps-utils/html/bin/wave

blimps-utils-dbgsym

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/b3/1fe833082cf677db5fb84acfdb8765e4ad9dcf.debug

libblimps3

• I hardening-no-bindnow
  • usr/lib/libblimps.so.3.0.0
• I no-symbols-control-file
  • usr/lib/libblimps.so.3.0.0
• X shlib-calls-exit
  • usr/lib/libblimps.so.3.0.0
• I spelling-error-in-binary
  • usr/lib/libblimps.so.3.0.0 nam name
  • usr/lib/libblimps.so.3.0.0 occured occurred
  • usr/lib/libblimps.so.3.0.0 outputing outputting
  • usr/lib/libblimps.so.3.0.0 retur return

libblimps3-dbgsym

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/d7/e047413df8095339461122e593b24b553cf656.debug

• I debian-rules-contains-unnecessary-get-orig-source-target
• I debian-rules-parses-dpkg-parsechangelog
  • (line 11)
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 130)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I override_dh_auto_test-does-not-check-DEB_BUILD_OPTIONS
  • (line 45)
• P package-uses-old-debhelper-compat-version
  • 9
• W spelling-error-in-patch-description
  • debian/patches/gcc-64bit.patch unfortunatly unfortunately
• I vcs-field-uses-insecure-uri
  • vcs-svn svn://anonscm.debian.org/debian-med/trunk/packages/bowtie/trunk/
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/viewvc/debian-med/trunk/packages/bowtie/trunk/
  • vcs-svn svn://anonscm.debian.org/debian-med/trunk/packages/bowtie/trunk/

bowtie-examples

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/LGPL

• P debian-watch-does-not-check-gpg-signature

bowtie

• O binary-without-manpage
  • usr/bin/bowtie-align-l
  • usr/bin/bowtie-align-l-debug
  • usr/bin/bowtie-align-s
  • usr/bin/bowtie-align-s-debug
  • usr/bin/bowtie-build-l
  • usr/bin/bowtie-build-l-debug
  • usr/bin/bowtie-build-s
  • usr/bin/bowtie-build-s-debug
  • usr/bin/bowtie-inspect-l
  • usr/bin/bowtie-inspect-l-debug
  • usr/bin/bowtie-inspect-s
  • usr/bin/bowtie-inspect-s-debug
• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• X duplicate-files
  • usr/share/doc/bowtie/tests/example1.out usr/share/doc/bowtie/tests/example3.out usr/share/doc/bowtie/tests/example8.out
  • usr/share/doc/bowtie/tests/example6.out usr/share/doc/bowtie/tests/example9.out

• W ancient-standards-version
  • 3.9.6 (released 2014-09-17) (current is 4.2.1)
• I debian-rules-contains-unnecessary-get-orig-source-target
• I debian-rules-parses-dpkg-parsechangelog
  • (line 3)
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 131)
  • debian/changelog (line 132)
  • debian/changelog (line 138)
  • debian/changelog (line 145)
  • debian/changelog (line 152)
  • debian/changelog (line 153)
  • debian/changelog (line 170)
  • debian/changelog (line 29)
  • debian/changelog (line 71)
  • debian/changelog (line 72)
  • debian/changelog (line 73)
  • debian/changelog (line 79)
  • debian/changelog (line 90)
  • debian/control (line 24)
  • debian/control (line 25)
  • debian/control (line 26)
  • debian/control (line 27)
  • debian/control (line 30)
  • debian/control (line 39)
  • debian/control (line 40)
  • debian/control (line 41)
  • debian/control (line 42)
  • debian/control (line 45)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 9
• W patch-file-present-but-not-mentioned-in-series
  • fix_makefile_machine_detection.patch
• W unnecessary-testsuite-autopkgtest-field
• I vcs-field-uses-insecure-uri
  • vcs-git git://anonscm.debian.org/debian-med/bowtie2.git
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/bowtie2.git
  • vcs-git git://anonscm.debian.org/debian-med/bowtie2.git

bowtie2-examples

• E wrong-path-for-interpreter
  • usr/share/doc/bowtie2/examples/scripts/debug_wrapper.pl (#!/usr/bin/env perl != /usr/bin/perl)

• P debian-watch-does-not-check-gpg-signature

bowtie2

• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• W manpage-has-errors-from-man
  • usr/share/man/man1/bowtie2-inspect.1.gz 8: warning [p 1, 1.5i]: cannot adjust line

• P debian-watch-does-not-check-gpg-signature
• P package-uses-old-debhelper-compat-version
  • 10
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/boxshade.git
  • vcs-git https://anonscm.debian.org/git/debian-med/boxshade.git

boxshade

• X binary-file-built-without-LFS-support
  • usr/lib/boxshade/boxshade

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 6)
  • debian/changelog (line 73)
  • debian/rules (line 12)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

bppphyview

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL
• I extended-description-is-probably-too-short

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 153)
  • debian/changelog (line 48)
  • debian/changelog (line 54)
• I testsuite-autopkgtest-missing

bppsuite

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL
• I hardening-no-fortify-functions
  • usr/bin/bppdist
  • usr/bin/bppdist
  • usr/bin/bppmixedlikelihoods
  • usr/bin/bppmixedlikelihoods
  • usr/bin/bpppopstats
  • usr/bin/bpppopstats
• I spelling-error-in-binary
  • usr/bin/bppalnscore occurence occurrence
  • usr/bin/bppalnscore occurence occurrence
  • usr/bin/bppancestor particularily particularly
  • usr/bin/bppancestor particularily particularly
  • usr/bin/bppmixedlikelihoods particularily particularly
  • usr/bin/bppmixedlikelihoods particularily particularly
  • usr/bin/bppml particularily particularly
  • usr/bin/bppml particularily particularly
  • usr/bin/bpppopstats ouptut output
  • usr/bin/bpppopstats ouptut output
  • usr/bin/bppseqgen begining beginning
  • usr/bin/bppseqgen begining beginning
  • usr/bin/bpptreedraw controler controller
  • usr/bin/bpptreedraw controler controller

bppsuite-examples

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
• X duplicate-files
  • usr/share/doc/bppsuite-examples/examples/MaximumLikelihood/Nucleotides/Homogeneous/Ancestor.bpp usr/share/doc/bppsuite-examples/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/Ancestor.bpp

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I out-of-date-standards-version
  • 4.1.4 (released 2018-04-05) (current is 4.2.1)
• P source-contains-empty-directory
  • bin/
  • lib/
• I testsuite-autopkgtest-missing

brig

• W bad-jar-name
  • usr/share/java/BRIG-0.95.jar
  • usr/share/java/BRIG-0.95.jar
• W binary-without-manpage
  • usr/bin/brig
  • usr/bin/brig
• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
  • usr/share/common-licenses/GPL

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 178)
  • debian/changelog (line 29)
  • debian/changelog (line 31)
  • debian/changelog (line 33)
  • debian/control (line 52)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/bwa.git
  • vcs-git https://anonscm.debian.org/git/debian-med/bwa.git

bwa

• I spelling-error-in-manpage
  • usr/share/man/man1/bwa.1.gz extentions extensions
  • usr/share/man/man1/bwa.1.gz occurence occurrence
  • usr/share/man/man1/bwa.1.gz openning opening
  • usr/share/man/man1/bwa.1.gz ouptut output
  • usr/share/man/man1/bwa.1.gz overriden overridden
• E wrong-path-for-interpreter
  • usr/share/bwa/qualfa2fq.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/bwa/xa2multi.pl (#!/usr/bin/env perl != /usr/bin/perl)

• I debian-rules-parses-dpkg-parsechangelog
  • (line 9)
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 7)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing

cain

• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/cain.desktop
• I package-contains-documentation-outside-usr-share-doc
  • usr/include/cain/loki/readme.txt

cain-examples

• I package-contains-documentation-outside-usr-share-doc
  • usr/share/cain/examples/cain/dsmts23/Readme.txt
  • usr/share/cain/examples/sbml/dsmts31/README.txt

• P debian-watch-does-not-check-gpg-signature
• W incomplete-creative-commons-license
• P package-does-not-install-examples
  • sdk/libraries/qtpropertybrowser/examples/
• P package-uses-old-debhelper-compat-version
  • 10

libcamitk-dev

• X development-package-ships-elf-binary-in-path
  • usr/bin/camitk-cepgenerator
  • usr/bin/camitk-cepgenerator
  • usr/bin/camitk-testactions
  • usr/bin/camitk-testactions
  • usr/bin/camitk-testcomponents
  • usr/bin/camitk-testcomponents
  • usr/bin/camitk-wizard
  • usr/bin/camitk-wizard
• I hardening-no-fortify-functions
  • usr/bin/camitk-testcomponents
  • usr/bin/camitk-testcomponents
• I spelling-error-in-binary
  • usr/bin/camitk-wizard exemple example
  • usr/bin/camitk-wizard exemple example
  • usr/bin/camitk-wizard wether whether
  • usr/bin/camitk-wizard wether whether
• I unstripped-static-library
  • usr/lib/camitk-4.1/liblmlschema.a(Acceleration.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(AppliedTo.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(DirState.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Direction.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Force.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Load.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Loads.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Pressure.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Rotation.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Transition.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Translation.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(Units.cxx.o)
  • usr/lib/camitk-4.1/liblmlschema.a(ValueEvent.cxx.o)

libcamitk4

• I no-symbols-control-file
  • usr/lib/libcamitkcore.so.4.1.2
  • usr/lib/libcamitkcore.so.4.1.2
  • usr/lib/libmonitoring.so.4.1.2
  • usr/lib/libmonitoring.so.4.1.2
• O package-name-doesnt-match-sonames
  • libcamitkcore4 libmonitoring4
  • libcamitkcore4 libmonitoring4
• I spelling-error-in-binary
  • usr/lib/camitk-4.1/actions/libmml.so.4.1.2 Pres Press
  • usr/lib/camitk-4.1/components/libdicom.so.4.1.2 Serie Series
  • usr/lib/camitk-4.1/components/libdicom.so.4.1.2 Serie Series
  • usr/lib/libcamitkcore.so.4.1.2 Substract Subtract
  • usr/lib/libcamitkcore.so.4.1.2 Substract Subtract
  • usr/lib/libmonitoring.so.4.1.2 Pres Press
  • usr/lib/libmonitoring.so.4.1.2 ment meant

libcamitk4-data

• I duplicated-compressed-file
  • usr/share/camitk-4.1/testdata/BigEndianCompressed.img.gz

libqtpropertybrowser4

• I no-symbols-control-file
  • usr/lib/libqtpropertybrowser.so.4.1.2
  • usr/lib/libqtpropertybrowser.so.4.1.2

• I debian-rules-parses-dpkg-parsechangelog
  • (line 12)
  • (line 13)
• P debian-watch-does-not-check-gpg-signature
• I file-contains-fixme-placeholder
  • debian/rules:71 FIXME
• P file-contains-trailing-whitespace
  • debian/changelog (line 87)
  • debian/control (line 26)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I out-of-date-standards-version
  • 3.9.8 (released 2016-04-06) (current is 4.2.1)
• P package-uses-old-debhelper-compat-version
  • 9
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/cd-hit.git
  • vcs-git https://anonscm.debian.org/git/debian-med/cd-hit.git

cd-hit

• X binary-file-built-without-LFS-support
  • usr/lib/cd-hit/cd-hit
  • usr/lib/cd-hit/cd-hit-2d
  • usr/lib/cd-hit/cd-hit-454
  • usr/lib/cd-hit/cd-hit-div
  • usr/lib/cd-hit/cd-hit-est
  • usr/lib/cd-hit/cd-hit-est-2d
• W binary-without-manpage
  • usr/bin/cdhit
  • usr/bin/cdhit
  • usr/bin/cdhit-2d
  • usr/bin/cdhit-2d
  • usr/bin/cdhit-454
  • usr/bin/cdhit-454
  • usr/bin/cdhit-est
  • usr/bin/cdhit-est
  • usr/bin/cdhit-est-2d
  • usr/bin/cdhit-est-2d
  • usr/bin/clstr2tree
  • usr/bin/clstr2tree
  • usr/bin/clstr_merge
  • usr/bin/clstr_merge
  • usr/bin/clstr_merge_noorder
  • usr/bin/clstr_merge_noorder
  • usr/bin/clstr_reduce
  • usr/bin/clstr_reduce
  • usr/bin/clstr_renumber
  • usr/bin/clstr_renumber
  • usr/bin/clstr_rev
  • usr/bin/clstr_rev
  • usr/bin/clstr_sort_by
  • usr/bin/clstr_sort_by
  • usr/bin/clstr_sort_prot_by
  • usr/bin/clstr_sort_prot_by
  • usr/bin/make_multi_seq
  • usr/bin/make_multi_seq
• I spelling-error-in-binary
  • usr/lib/cd-hit/cd-hit-div writen written
  • usr/lib/cd-hit/cd-hit-div writen written
• I spelling-error-in-manpage
  • usr/share/man/man1/cd-hit-2d-para.1.gz requred required
  • usr/share/man/man1/cd-hit-2d-para.1.gz requred required
  • usr/share/man/man1/cd-hit-para.1.gz requred required
  • usr/share/man/man1/cd-hit-para.1.gz requred required

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 33)
  • debian/changelog (line 41)
• P hyphen-in-upstream-part-of-debian-changelog-version
  • 0.99-20100722
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• W spelling-error-in-patch-description
  • debian/patches/workaround-lintian-false-positive gramatically grammatically
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/cdbfasta.git
  • vcs-git https://anonscm.debian.org/git/debian-med/cdbfasta.git

cdbfasta

• I hardening-no-fortify-functions
  • usr/bin/cdbfasta
  • usr/bin/cdbfasta
  • usr/bin/cdbyank
  • usr/bin/cdbyank

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/centrifuge.git
  • vcs-git https://anonscm.debian.org/git/debian-med/centrifuge.git

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/centrifuge.git
  • vcs-git https://anonscm.debian.org/git/debian-med/centrifuge.git

centrifuge

• P copyright-refers-to-symlink-license
  • usr/share/common-licenses/GPL
• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• I hardening-no-fortify-functions
  • usr/lib/centrifuge/centrifuge-build-bin
  • usr/lib/centrifuge/centrifuge-class
  • usr/lib/centrifuge/centrifuge-inspect-bin
• I package-contains-documentation-outside-usr-share-doc
  • usr/lib/centrifuge/share/centrifuge/doc/README
• I possible-documentation-but-no-doc-base-registration
• W script-not-executable
  • usr/lib/centrifuge/share/centrifuge/doc/strip_markdown.pl
• E wrong-path-for-interpreter
  • usr/lib/centrifuge/centrifuge (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/centrifuge-BuildSharedSequence.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/centrifuge-RemoveEmptySequence.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/centrifuge-RemoveN.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/centrifuge-compress.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/centrifuge-kreport (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/centrifuge-sort-nt.pl (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/lib/centrifuge/share/centrifuge/doc/strip_markdown.pl (#!/usr/bin/env perl != /usr/bin/perl)
• W zero-byte-file-in-doc-directory
  • usr/share/doc/centrifuge/html/manual.inc.html

• W build-depends-on-python-sphinx-only
• P debian-watch-does-not-check-gpg-signature
• I out-of-date-standards-version
  • 4.1.4 (released 2018-04-05) (current is 4.2.1)
• W python-foo-but-no-python3-foo
  • python-cfflib
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

• P debian-watch-does-not-check-gpg-signature
• P insane-line-length-in-source-file
  • src/ca/ualberta/stothard/cgview/includes/overlib.js line length is 562 characters (>512)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P source-contains-empty-directory
  • ca/ualberta/stothard/cgview/
  • lib/
• P source-contains-prebuilt-javascript-object
  • src/ca/ualberta/stothard/cgview/includes/overlib.js line length is 562 characters (>512)
• O source-is-missing
  • src/ca/ualberta/stothard/cgview/includes/overlib.js line length is 562 characters (>512)
• I testsuite-autopkgtest-missing

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 9
• W patch-file-present-but-not-mentioned-in-series
  • charls_add_cmake_install_target.patch
  • charls_add_sharedlib_soname.patch
  • charls_fix_tests.patch
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/charls.git
  • vcs-git https://anonscm.debian.org/git/debian-med/charls.git

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 362)
  • debian/rules (line 59)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I override_dh_auto_test-does-not-check-DEB_BUILD_OPTIONS
  • (line 29)
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

cimg-doc

• X duplicate-files
  • usr/share/doc/cimg-dev/html/images/centre.jpg usr/share/doc/cimg-dev/html/images/centre_no_repeat.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_box3d.jpg usr/share/doc/cimg-dev/html/ref_box3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_cool.jpg usr/share/doc/cimg-dev/html/ref_colormap_cool.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_cube.jpg usr/share/doc/cimg-dev/html/ref_colormap_cube.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_default.jpg usr/share/doc/cimg-dev/html/ref_colormap_default.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_flag.jpg usr/share/doc/cimg-dev/html/ref_colormap_flag.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_hot.jpg usr/share/doc/cimg-dev/html/ref_colormap_hot.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_hsv.jpg usr/share/doc/cimg-dev/html/ref_colormap_hsv.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_jet.jpg usr/share/doc/cimg-dev/html/ref_colormap_jet.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_colormap_lines.jpg usr/share/doc/cimg-dev/html/ref_colormap_lines.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_cone3d.jpg usr/share/doc/cimg-dev/html/ref_cone3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_constructor1.jpg usr/share/doc/cimg-dev/html/ref_constructor1.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_constructor2.jpg usr/share/doc/cimg-dev/html/ref_constructor2.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_cut.jpg usr/share/doc/cimg-dev/html/ref_cut.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_cylinder3d.jpg usr/share/doc/cimg-dev/html/ref_cylinder3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_elevation3d.jpg usr/share/doc/cimg-dev/html/ref_elevation3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_ellipsoid3d.jpg usr/share/doc/cimg-dev/html/ref_ellipsoid3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_equalize.jpg usr/share/doc/cimg-dev/html/ref_equalize.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_histogram.jpg usr/share/doc/cimg-dev/html/ref_histogram.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_image.jpg usr/share/doc/cimg-dev/html/ref_image.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_index.jpg usr/share/doc/cimg-dev/html/ref_index.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_isoline3d.jpg usr/share/doc/cimg-dev/html/ref_isoline3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_isosurface3d.jpg usr/share/doc/cimg-dev/html/ref_isosurface3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_map.jpg usr/share/doc/cimg-dev/html/ref_map.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_noise.jpg usr/share/doc/cimg-dev/html/ref_noise.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_norm.jpg usr/share/doc/cimg-dev/html/ref_norm.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_normalize.jpg usr/share/doc/cimg-dev/html/ref_normalize.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_normalize2.jpg usr/share/doc/cimg-dev/html/ref_normalize2.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_operator_comma.jpg usr/share/doc/cimg-dev/html/ref_operator_comma.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_operator_eq.jpg usr/share/doc/cimg-dev/html/ref_operator_eq.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_operator_less.jpg usr/share/doc/cimg-dev/html/ref_operator_less.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_operator_minus.jpg usr/share/doc/cimg-dev/html/ref_operator_minus.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_operator_plus.jpg usr/share/doc/cimg-dev/html/ref_operator_plus.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_operator_plus1.jpg usr/share/doc/cimg-dev/html/ref_operator_plus1.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_plane3d.jpg usr/share/doc/cimg-dev/html/ref_plane3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_quantize.jpg usr/share/doc/cimg-dev/html/ref_quantize.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_sphere3d.jpg usr/share/doc/cimg-dev/html/ref_sphere3d.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_sqr.jpg usr/share/doc/cimg-dev/html/ref_sqr.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_sqrt.jpg usr/share/doc/cimg-dev/html/ref_sqrt.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_threshold.jpg usr/share/doc/cimg-dev/html/ref_threshold.jpg
  • usr/share/doc/cimg-dev/html/img/reference/ref_torus3d.jpg usr/share/doc/cimg-dev/html/ref_torus3d.jpg
• W privacy-breach-generic
  • usr/share/doc/cimg-dev/html/img/video_blobs.html [<embed src="http://www.youtube.com/v/wocdcffz7z4?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/wocdcffz7z4?version=3)
  • usr/share/doc/cimg-dev/html/img/video_bubble.html [<embed src="http://www.youtube.com/v/oxk6wc4vsbe?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/oxk6wc4vsbe?version=3)
  • usr/share/doc/cimg-dev/html/img/video_bump.html [<embed src="http://www.youtube.com/v/ggjtelq5ahi?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/ggjtelq5ahi?version=3)
  • usr/share/doc/cimg-dev/html/img/video_cimgdemo.html [<embed src="http://www.youtube.com/v/mtvhje_ff18?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/mtvhje_ff18?version=3)
  • usr/share/doc/cimg-dev/html/img/video_curveeditor.html [<embed src="http://www.youtube.com/v/vnctzhnxjvy?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/vnctzhnxjvy?version=3)
  • usr/share/doc/cimg-dev/html/img/video_doubletorus.html [<embed src="http://www.youtube.com/v/y1bhhxwsoa4?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/y1bhhxwsoa4?version=3)
  • usr/share/doc/cimg-dev/html/img/video_dtmri.html [<embed src="http://www.youtube.com/v/ip2ituxhcls?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/ip2ituxhcls?version=3)
  • usr/share/doc/cimg-dev/html/img/video_fourier.html [<embed src="http://www.youtube.com/v/op0xovmedpe?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/op0xovmedpe?version=3)
  • usr/share/doc/cimg-dev/html/img/video_imagesurface.html [<embed src="http://www.youtube.com/v/olbxh-gkv3u?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/olbxh-gkv3u?version=3)
  • usr/share/doc/cimg-dev/html/img/video_jawbreaker.html [<embed src="http://www.youtube.com/v/3z4jdb-wafs?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/3z4jdb-wafs?version=3)
  • usr/share/doc/cimg-dev/html/img/video_landscape.html [<embed src="http://www.youtube.com/v/i8_wcewwpoo?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/i8_wcewwpoo?version=3)
  • usr/share/doc/cimg-dev/html/img/video_mandelbrot.html [<embed src="http://www.youtube.com/v/ir80v5r9ajm?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/ir80v5r9ajm?version=3)
  • usr/share/doc/cimg-dev/html/img/video_menu.html [<embed src="http://www.youtube.com/v/t0tjzmytisg?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/t0tjzmytisg?version=3)
  • usr/share/doc/cimg-dev/html/img/video_metaballs.html [<embed src="http://www.youtube.com/v/-s_r76oxzyy?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/-s_r76oxzyy?version=3)
  • usr/share/doc/cimg-dev/html/img/video_minipaint.html [<embed src="http://www.youtube.com/v/4hbisksvzki?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/4hbisksvzki?version=3)
  • usr/share/doc/cimg-dev/html/img/video_plasma.html [<embed src="http://www.youtube.com/v/na8hcaykbfo?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/na8hcaykbfo?version=3)
  • usr/share/doc/cimg-dev/html/img/video_reflection.html [<embed src="http://www.youtube.com/v/5wqgkejdrcw?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/5wqgkejdrcw?version=3)
  • usr/share/doc/cimg-dev/html/img/video_shadebobs.html [<embed src="http://www.youtube.com/v/q91cyn6x8ly?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/q91cyn6x8ly?version=3)
  • usr/share/doc/cimg-dev/html/img/video_tetris.html [<embed src="http://www.youtube.com/v/iksy2kceh38?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/iksy2kceh38?version=3)
  • usr/share/doc/cimg-dev/html/img/video_waves.html [<embed src="http://www.youtube.com/v/kne-rxjlddm?version=3" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="640" height="390">] (http://www.youtube.com/v/kne-rxjlddm?version=3)

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://circos.ca/software/download
• P file-contains-trailing-whitespace
  • debian/changelog (line 114)
  • debian/changelog (line 120)
  • debian/changelog (line 126)
  • debian/changelog (line 45)
  • debian/changelog (line 84)
  • debian/changelog (line 90)
  • debian/rules (line 9)
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/circos.git
  • vcs-git https://anonscm.debian.org/git/debian-med/circos.git

circos

• X duplicate-files
  • usr/share/doc/circos/examples/data/heatmap.hs.mm.10e6.txt.gz usr/share/doc/circos/examples/data/heatmap.hs.rn.10e6.txt.gz
  • usr/share/doc/circos/examples/data/heatmap.hs.mm.20e6.txt.gz usr/share/doc/circos/examples/data/heatmap.hs.rn.20e6.txt.gz
  • usr/share/doc/circos/examples/data/heatmap.hs.mm.50e6.txt usr/share/doc/circos/examples/data/heatmap.hs.rn.50e6.txt
  • usr/share/doc/circos/examples/data/heatmap.hs.mm.5e6.txt.gz usr/share/doc/circos/examples/data/heatmap.hs.rn.5e6.txt.gz
  • usr/share/doc/circos/examples/data/karyotype/karyotype.arabidopsis.tair10.txt usr/share/doc/circos/examples/data/karyotype/karyotype.arabidopsis.txt
  • usr/share/doc/circos/examples/data/karyotype/karyotype.chimp.pt4.txt.gz usr/share/doc/circos/examples/data/karyotype/karyotype.chimp.txt.gz
  • usr/share/doc/circos/examples/data/karyotype/karyotype.drosophila.lowres.dm3.txt.gz usr/share/doc/circos/examples/data/karyotype/karyotype.drosophila.txt.gz
  • usr/share/doc/circos/examples/data/karyotype/karyotype.human.hg19.txt.gz usr/share/doc/circos/examples/data/karyotype/karyotype.human.txt.gz
  • usr/share/doc/circos/examples/data/karyotype/karyotype.mouse.mm10.txt.gz usr/share/doc/circos/examples/data/karyotype/karyotype.mouse.txt.gz
  • usr/share/doc/circos/examples/data/karyotype/karyotype.rat.rn4.txt.gz usr/share/doc/circos/examples/data/karyotype/karyotype.rat.txt.gz
  • usr/share/doc/circos/examples/data/karyotype/karyotype.rm.3.txt usr/share/doc/circos/examples/data/karyotype/karyotype.rm.txt
• W manpage-has-bad-whatis-entry
  • usr/share/man/man1/circos.1.gz
• I spelling-error-in-manpage
  • usr/share/man/man1/circos.1.gz overide override
  • usr/share/man/man1/circos.1.gz unuseable unusable
• E wrong-path-for-interpreter
  • etc/circos/makehuesteps (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/bin/circos (#!/usr/bin/env perl != /usr/bin/perl)

fonts-circos-symbols

• I font-outside-font-dir
  • usr/share/circos/fonts/symbols/circossymbols.otf

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://circos.ca/software/download
• P file-contains-trailing-whitespace
  • debian/changelog (line 41)
  • debian/changelog (line 48)
  • debian/changelog (line 55)
  • debian/changelog (line 61)
  • debian/rules (line 3)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-empty-directory
  • tools/binlinks/doc/
  • tools/resample/etc/
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/circos-tools.git
  • vcs-git https://anonscm.debian.org/git/debian-med/circos-tools.git

circos-tools

• I package-contains-documentation-outside-usr-share-doc
  • usr/share/circos/tools/clustal2link/README
  • usr/share/circos/tools/connectogram/README
  • usr/share/circos/tools/tableviewer/README
• I package-contains-empty-directory
  • usr/share/circos/tools/binlinks/doc/
  • usr/share/circos/tools/resample/etc/
• E wrong-path-for-interpreter
  • usr/share/circos/tools/binlinks/bin/binlinks (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/binlinks/data/toplinks (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/bundlelinks/bin/bundlelinks (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/calcdatarange/bin/calcdatarange (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/categoryviewer/bin/parse-category (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/categoryviewer/data/makedata (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/clustal2link/bin/clustal2link (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/colorinterpolate/bin/colorinterpolate (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/connectogram/parsemap (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/convertlinks/bin/convertlinks (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/filterlinks/bin/filterlinks (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/maketutorialimages/bin/make_tutorial_images (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/matrix/matrix (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/matrix/unmatrix (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/orderchr/bin/orderchr (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/randomdata/bin/randomdata (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/randomlinks/bin/randomlinks (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/resample/bin/resample (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/tableviewer/bin/make-conf (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/tableviewer/bin/make-table (#!/usr/bin/env perl != /usr/bin/perl)
  • usr/share/circos/tools/tableviewer/bin/parse-table (#!/usr/bin/env perl != /usr/bin/perl)

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://bioinformatics.hungry.com/clearcut/clearcut-([0-9.]+).tar.gz
• P file-contains-trailing-whitespace
  • debian/control (line 20)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/clearcut.git
  • vcs-git https://anonscm.debian.org/git/debian-med/clearcut.git

clearcut

• X binary-file-built-without-LFS-support
  • usr/bin/clearcut
• I hardening-no-bindnow
  • usr/bin/clearcut
  • usr/bin/clearcut
• I hardening-no-fortify-functions
  • usr/bin/clearcut
  • usr/bin/clearcut

clearcut-dbgsym

• W debug-file-with-no-debug-symbols
  • usr/lib/debug/.build-id/27/39b8faf2cf1b2e3f92a3d5bef9516958dc4b91.debug
  • usr/lib/debug/.build-id/61/a68f85b73b4ef89dfe30a0766b9df0a4099782.debug

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://www.xavierdidelot.xtreemhost.com/clonalframe.htm
• P file-contains-trailing-whitespace
  • debian/rules (line 27)
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/clonalframe.git
  • vcs-git https://anonscm.debian.org/git/debian-med/clonalframe.git

clonalframe

• X binary-file-built-without-LFS-support
  • usr/bin/ClonalFrame
• I hardening-no-fortify-functions
  • usr/bin/ClonalFrame
  • usr/bin/ClonalFrame

• P debian-watch-does-not-check-gpg-signature
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/clonalframeml.git
  • vcs-git https://anonscm.debian.org/git/debian-med/clonalframeml.git

clonalframeml

• I hardening-no-fortify-functions
  • usr/bin/ClonalFrameML
  • usr/bin/ClonalFrameML

• P debian-watch-does-not-check-gpg-signature
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/clonalorigin.git
  • vcs-git https://anonscm.debian.org/git/debian-med/clonalorigin.git

clonalorigin

• X binary-file-built-without-LFS-support
  • usr/bin/warg
• W binary-without-manpage
  • usr/bin/blocksplit
  • usr/bin/blocksplit
  • usr/bin/computeMedians
  • usr/bin/computeMedians
  • usr/bin/makeMauveWargFile
  • usr/bin/makeMauveWargFile
• I spelling-error-in-binary
  • usr/bin/warg lik link
  • usr/bin/warg lik link

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://www.clustal.org/omega/clustal-omega-(.*)\.tar\.gz
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/

clustalo

• X binary-file-built-without-LFS-support
  • usr/bin/clustalo
• I spelling-error-in-binary
  • usr/bin/clustalo exceded exceeded
  • usr/bin/clustalo exceded exceeded
  • usr/bin/clustalo occured occurred
  • usr/bin/clustalo occured occurred

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://www.clustal.org/download/current/clustalw-([\.\d]*).tar.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 123)
  • debian/changelog (line 155)
  • debian/changelog (line 202)
  • debian/changelog (line 274)
  • debian/changelog (line 345)
  • debian/changelog (line 377)
  • debian/changelog (line 385)
  • debian/control (line 33)
  • debian/rules (line 19)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/

clustalw

• X binary-file-built-without-LFS-support
  • usr/bin/clustalw

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://www.clustal.org/download/current/clustalx-([\.\d]*).tar.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 213)
  • debian/changelog (line 284)
  • debian/changelog (line 316)
  • debian/changelog (line 324)
• P package-uses-old-debhelper-compat-version
  • 9
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/clustalx.git
  • vcs-git https://anonscm.debian.org/git/debian-med/clustalx.git

clustalx

• X binary-file-built-without-LFS-support
  • usr/bin/clustalx
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/clustalx.desktop
  • usr/share/applications/clustalx.desktop
• I hardening-no-fortify-functions
  • usr/bin/clustalx
  • usr/bin/clustalx

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://bonsai.hgc.jp/~mdehoon/software/cluster/software.htm
• P file-contains-trailing-whitespace
  • debian/changelog (line 23)
  • debian/changelog (line 41)
  • debian/changelog (line 46)
  • debian/changelog (line 50)
  • debian/changelog (line 65)
  • debian/rules (line 23)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I missing-explanation-for-contrib-or-non-free-package
• P package-uses-old-debhelper-compat-version
  • 10
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/cluster3.git
  • vcs-git https://anonscm.debian.org/git/debian-med/cluster3.git

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 5)
  • debian/changelog (line 6)
  • debian/changelog (line 80)
  • debian/rules (line 12)
  • debian/rules (line 28)
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/coils.git
  • vcs-git https://anonscm.debian.org/git/debian-med/coils.git

ncoils

• X binary-file-built-without-LFS-support
  • usr/bin/ncoils
• I hardening-no-fortify-functions
  • usr/bin/ncoils
  • usr/bin/ncoils

• P debian-watch-does-not-check-gpg-signature
• O debian-watch-file-should-mangle-version
  • line 3
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P source-contains-empty-directory
  • bin/
  • lib/

concavity

• X binary-file-built-without-LFS-support
  • usr/bin/concavity

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 20)
  • debian/changelog (line 23)
  • debian/rules (line 55)
• P package-uses-old-debhelper-compat-version
  • 10
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/conservation-code.git
  • vcs-git https://anonscm.debian.org/git/debian-med/conservation-code.git

conservation-code

• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://gforge.inria.fr/frs/?group_id=3008
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/

crac

• W binary-without-manpage
  • usr/bin/crac-client
  • usr/bin/crac-index
• X duplicate-files
  • usr/share/doc/crac/examples/test_f/bug/bug-15677-genome.conf usr/share/doc/crac/examples/test_f/bug/bug-16581-genome.conf
  • usr/share/doc/crac/examples/test_f/bug/bug-15677-genome.ssa.gz usr/share/doc/crac/examples/test_f/bug/bug-16581-genome.ssa.gz
  • usr/share/doc/crac/examples/test_f/index_genomes.sh.trs usr/share/doc/crac/examples/test_f/launch_sg.sh.trs usr/share/doc/crac/examples/test_f/test_index.sh.trs
• W manpage-has-bad-whatis-entry
  • usr/share/man/man1/crac.1.gz
• I spelling-error-in-binary
  • usr/bin/crac Erorr Error
  • usr/bin/crac alignement alignment
  • usr/bin/crac informations information
  • usr/bin/crac-index informations information
• I spelling-error-in-manpage
  • usr/share/man/man1/crac.1.gz alignement alignment
  • usr/share/man/man1/crac.1.gz differents different
  • usr/share/man/man1/crac.1.gz informations information
  • usr/share/man/man1/crac.1.gz informations information
  • usr/share/man/man1/crac.1.gz informations information
  • usr/share/man/man1/crac.1.gz softwares software

• P debian-watch-does-not-check-gpg-signature
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-old-debhelper-compat-version
  • 9
• P source-contains-hg-tags-file
  • .hgtags
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

python-cram

• X application-in-library-section
  • python usr/bin/cram
• W binary-without-manpage
  • usr/bin/cram
• X library-package-name-for-application
  • usr/bin/cram

python3-cram

• X application-in-library-section
  • python usr/bin/cram3
• W binary-without-manpage
  • usr/bin/cram3
• X library-package-name-for-application
  • usr/bin/cram3

• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 186)
  • debian/changelog (line 187)
  • debian/changelog (line 228)
  • debian/changelog (line 252)
  • debian/changelog (line 258)
  • debian/changelog (line 266)
  • debian/changelog (line 272)
  • debian/changelog (line 280)
  • debian/changelog (line 282)
  • debian/changelog (line 302)
  • debian/changelog (line 304)
  • debian/changelog (line 316)
  • debian/changelog (line 320)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• I testsuite-autopkgtest-missing

ctn

• X binary-file-built-without-LFS-support
  • usr/bin/archive_agent
  • usr/bin/archive_cleaner
  • usr/bin/archive_server
  • usr/bin/clone_study
  • usr/bin/commit_agent
  • usr/bin/create_greyscale_module
  • usr/bin/create_print_entry
  • usr/bin/ctndisp
  • usr/bin/ctnnetwork
  • usr/bin/dcm_add_fragments
  • usr/bin/dcm_create_object
  • usr/bin/dcm_ctnto10
  • usr/bin/dcm_diff
  • usr/bin/dcm_dump_compressed
  • usr/bin/dcm_dump_element
  • usr/bin/dcm_dump_file
  • usr/bin/dcm_make_object
  • usr/bin/dcm_map_to_8
  • usr/bin/dcm_mask_image
  • usr/bin/dcm_modify_elements
  • usr/bin/dcm_modify_object
  • usr/bin/dcm_print_dictionary
  • usr/bin/dcm_resize
  • usr/bin/dcm_rm_element
  • usr/bin/dcm_rm_group
  • usr/bin/dcm_snoop
  • usr/bin/dcm_strip_odd_groups
  • usr/bin/dcm_template
  • usr/bin/dcm_to_html
  • usr/bin/dcm_to_text
  • usr/bin/dcm_verify
  • usr/bin/dcm_vr_patterns
  • usr/bin/dcm_x_disp
  • usr/bin/dicom_echo
  • usr/bin/dump_commit_requests
  • usr/bin/enq_ctndisp
  • usr/bin/enq_ctnnetwork
  • usr/bin/ex1_initiator
  • usr/bin/ex2_initiator
  • usr/bin/ex3_acceptor
  • usr/bin/ex3_initiator
  • usr/bin/ex4_acceptor
  • usr/bin/ex4_initiator
  • usr/bin/fillImageDB
  • usr/bin/fillRSA
  • usr/bin/fillRSAImpInterp
  • usr/bin/fis_server
  • usr/bin/gqinitq
  • usr/bin/gqkillq
  • usr/bin/icon_append_file
  • usr/bin/icon_append_index
  • usr/bin/icon_dump_file
  • usr/bin/icon_dump_index
  • usr/bin/image_server
  • usr/bin/kill_ctndisp
  • usr/bin/kill_ctnnetwork
  • usr/bin/load_control
  • usr/bin/mwlQuery
  • usr/bin/pq_ctndisp
  • usr/bin/pq_ctnnetwork
  • usr/bin/print_client
  • usr/bin/print_mgr
  • usr/bin/print_server
  • usr/bin/print_server_display
  • usr/bin/ris_gateway
  • usr/bin/send_image
  • usr/bin/send_results
  • usr/bin/send_study
  • usr/bin/simple_pacs
  • usr/bin/simple_storage
  • usr/bin/snp_to_files
  • usr/bin/storage_classes
  • usr/bin/storage_commit
• I spelling-error-in-binary
  • usr/bin/archive_agent tranport transport
  • usr/bin/archive_agent tranport transport
  • usr/bin/archive_agent uniqe unique
  • usr/bin/archive_agent uniqe unique
  • usr/bin/archive_cleaner tranport transport
  • usr/bin/archive_cleaner tranport transport
  • usr/bin/archive_cleaner uniqe unique
  • usr/bin/archive_cleaner uniqe unique
  • usr/bin/archive_server tranport transport
  • usr/bin/archive_server tranport transport
  • usr/bin/archive_server uniqe unique
  • usr/bin/archive_server uniqe unique
  • usr/bin/clone_study uniqe unique
  • usr/bin/clone_study uniqe unique
  • usr/bin/commit_agent tranport transport
  • usr/bin/commit_agent tranport transport
  • usr/bin/commit_agent uniqe unique
  • usr/bin/commit_agent uniqe unique
  • usr/bin/create_print_entry tranport transport
  • usr/bin/create_print_entry tranport transport
  • usr/bin/create_print_entry uniqe unique
  • usr/bin/create_print_entry uniqe unique
  • usr/bin/dcm_modify_object decription description
  • usr/bin/dcm_modify_object decription description
  • usr/bin/dcm_print_dictionary uniqe unique
  • usr/bin/dcm_print_dictionary uniqe unique
  • usr/bin/dcm_snoop tranport transport
  • usr/bin/dcm_snoop tranport transport
  • usr/bin/dcm_snoop uniqe unique
  • usr/bin/dcm_snoop uniqe unique
  • usr/bin/dicom_echo pres press
  • usr/bin/dicom_echo tranport transport
  • usr/bin/dicom_echo tranport transport
  • usr/bin/dicom_echo uniqe unique
  • usr/bin/dicom_echo uniqe unique
  • usr/bin/ex1_initiator tranport transport
  • usr/bin/ex1_initiator tranport transport
  • usr/bin/ex1_initiator uniqe unique
  • usr/bin/ex1_initiator uniqe unique
  • usr/bin/ex2_initiator tranport transport
  • usr/bin/ex2_initiator tranport transport
  • usr/bin/ex2_initiator uniqe unique
  • usr/bin/ex2_initiator uniqe unique
  • usr/bin/ex3_acceptor tranport transport
  • usr/bin/ex3_acceptor tranport transport
  • usr/bin/ex3_acceptor uniqe unique
  • usr/bin/ex3_acceptor uniqe unique
  • usr/bin/ex3_initiator tranport transport
  • usr/bin/ex3_initiator tranport transport
  • usr/bin/ex3_initiator uniqe unique
  • usr/bin/ex3_initiator uniqe unique
  • usr/bin/ex4_acceptor tranport transport
  • usr/bin/ex4_acceptor tranport transport
  • usr/bin/ex4_acceptor uniqe unique
  • usr/bin/ex4_acceptor uniqe unique
  • usr/bin/ex4_initiator tranport transport
  • usr/bin/ex4_initiator tranport transport
  • usr/bin/ex4_initiator uniqe unique
  • usr/bin/ex4_initiator uniqe unique
  • usr/bin/fillRSA uniqe unique
  • usr/bin/fillRSA uniqe unique
  • usr/bin/fis_server tranport transport
  • usr/bin/fis_server tranport transport
  • usr/bin/fis_server uniqe unique
  • usr/bin/fis_server uniqe unique
  • usr/bin/image_server tranport transport
  • usr/bin/image_server tranport transport
  • usr/bin/image_server uniqe unique
  • usr/bin/image_server uniqe unique
  • usr/bin/mwlQuery tranport transport
  • usr/bin/mwlQuery tranport transport
  • usr/bin/mwlQuery uniqe unique
  • usr/bin/mwlQuery uniqe unique
  • usr/bin/print_client Sofware Software
  • usr/bin/print_client Sofware Software
  • usr/bin/print_client pres press
  • usr/bin/print_client tranport transport
  • usr/bin/print_client tranport transport
  • usr/bin/print_client uniqe unique
  • usr/bin/print_client uniqe unique
  • usr/bin/print_mgr Sofware Software
  • usr/bin/print_mgr Sofware Software
  • usr/bin/print_mgr pres press
  • usr/bin/print_mgr tranport transport
  • usr/bin/print_mgr tranport transport
  • usr/bin/print_mgr uniqe unique
  • usr/bin/print_mgr uniqe unique
  • usr/bin/print_server Sofware Software
  • usr/bin/print_server Sofware Software
  • usr/bin/print_server tranport transport
  • usr/bin/print_server tranport transport
  • usr/bin/print_server uniqe unique
  • usr/bin/print_server uniqe unique
  • usr/bin/print_server_display Sofware Software
  • usr/bin/print_server_display Sofware Software
  • usr/bin/print_server_display successfull successful
  • usr/bin/print_server_display successfull successful
  • usr/bin/ris_gateway tranport transport
  • usr/bin/ris_gateway tranport transport
  • usr/bin/ris_gateway uniqe unique
  • usr/bin/ris_gateway uniqe unique
  • usr/bin/send_image sensitve sensitive
  • usr/bin/send_image sensitve sensitive
  • usr/bin/send_image tranport transport
  • usr/bin/send_image tranport transport
  • usr/bin/send_image uniqe unique
  • usr/bin/send_image uniqe unique
  • usr/bin/send_results tranport transport
  • usr/bin/send_results tranport transport
  • usr/bin/send_results uniqe unique
  • usr/bin/send_results uniqe unique
  • usr/bin/send_study tranport transport
  • usr/bin/send_study tranport transport
  • usr/bin/send_study uniqe unique
  • usr/bin/send_study uniqe unique
  • usr/bin/simple_pacs tranport transport
  • usr/bin/simple_pacs tranport transport
  • usr/bin/simple_pacs uniqe unique
  • usr/bin/simple_pacs uniqe unique
  • usr/bin/simple_storage tranport transport
  • usr/bin/simple_storage tranport transport
  • usr/bin/simple_storage uniqe unique
  • usr/bin/simple_storage uniqe unique
  • usr/bin/storage_classes tranport transport
  • usr/bin/storage_classes tranport transport
  • usr/bin/storage_classes uniqe unique
  • usr/bin/storage_classes uniqe unique
  • usr/bin/storage_commit tranport transport
  • usr/bin/storage_commit tranport transport
  • usr/bin/storage_commit uniqe unique
  • usr/bin/storage_commit uniqe unique

• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://ctsim.org/download.html
• P file-contains-trailing-whitespace
  • debian/changelog (line 167)
  • debian/changelog (line 179)
  • debian/changelog (line 210)
  • debian/changelog (line 243)
  • debian/changelog (line 342)
  • debian/changelog (line 418)
  • debian/changelog (line 424)
  • debian/changelog (line 483)
  • debian/changelog (line 494)
  • debian/changelog (line 512)
  • debian/changelog (line 523)
  • debian/changelog (line 545)
  • debian/changelog (line 565)
  • debian/changelog (line 622)
  • debian/changelog (line 638)
  • debian/control (line 41)
  • debian/control (line 44)
  • debian/control (line 56)
• P package-uses-old-debhelper-compat-version
  • 10
• X upstream-metadata-file-is-missing

ctsim

• X binary-file-built-without-LFS-support
  • usr/bin/ctsim
  • usr/bin/ctsimtext

ctsim-doc

• W privacy-breach-generic
  • usr/share/doc/ctsim-doc/examples/simulate.html [<link rel="stylesheet" href="http://www.ctsim.org/main.css" type="text/css">] (http://www.ctsim.org/main.css)

• P debian-watch-does-not-check-gpg-signature
• P package-uses-old-debhelper-compat-version
  • 9
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/debian-med/cufflinks.git
  • vcs-git https://anonscm.debian.org/git/debian-med/cufflinks.git

cufflinks

• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• I spelling-error-in-binary
  • usr/bin/cuffdiff constrasts contrasts
• I spelling-error-in-manpage
  • usr/share/man/man1/cuffdiff.1.gz constrasts contrasts

• W ancient-python-version-field
  • x-python-version 2.5
• P debian-watch-does-not-check-gpg-signature
• P file-contains-trailing-whitespace
  • debian/changelog (line 340)
  • debian/changelog (line 355)
  • debian/changelog (line 53)
  • debian/rules (line 1)
• P package-uses-old-debhelper-compat-version
  • 10
• P source-contains-empty-directory
  • doc/source/.templates/
• X upstream-metadata-file-is-missing

python-cvxopt (1.1.9+dfsg-3+b1; main)

• I hardening-no-fortify-functions
  • usr/lib/python2.7/dist-packages/cvxopt/base.i386-linux-gnu.so
  • usr/lib/python2.7/dist-packages/cvxopt/base.x86_64-linux-gnu.so
• I spelling-error-in-binary
  • usr/lib/python2.7/dist-packages/cvxopt/base.i386-linux-gnu.so prevously previously
  • usr/lib/python2.7/dist-packages/cvxopt/base.x86_64-linux-gnu.so prevously previously
  • usr/lib/python2.7/dist-packages/cvxopt/blas.i386-linux-gnu.so bandwith bandwidth
  • usr/lib/python2.7/dist-packages/cvxopt/blas.i386-linux-gnu.so vaule value
  • usr/lib/python2.7/dist-packages/cvxopt/blas.x86_64-linux-gnu.so bandwith bandwidth
  • usr/lib/python2.7/dist-packages/cvxopt/blas.x86_64-linux-gnu.so vaule value
  • usr/lib/python2.7/dist-packages/cvxopt/lapack.i386-linux-gnu.so postive positive
  • usr/lib/python2.7/dist-packages/cvxopt/lapack.x86_64-linux-gnu.so postive positive

python3-cvxopt (1.1.9+dfsg-3+b1; main)

• I spelling-error-in-binary
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-36m-i386-linux-gnu.so bandwith bandwidth
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-36m-i386-linux-gnu.so vaule value
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-36m-x86_64-linux-gnu.so bandwith bandwidth
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-36m-x86_64-linux-gnu.so vaule value
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-37m-i386-linux-gnu.so bandwith bandwidth
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-37m-i386-linux-gnu.so vaule value
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-37m-x86_64-linux-gnu.so bandwith bandwidth
  • usr/lib/python3/dist-packages/cvxopt/blas.cpython-37m-x86_64-linux-gnu.so vaule value
  • usr/lib/python3/dist-packages/cvxopt/lapack.cpython-36m-i386-linux-gnu.so postive positive
  • usr/lib/python3/dist-packages/cvxopt/lapack.cpython-36m-x86_64-linux-gnu.so postive positive
  • usr/lib/python3/dist-packages/cvxopt/lapack.cpython-37m-i386-linux-gnu.so postive positive
  • usr/lib/python3/dist-packages/cvxopt/lapack.cpython-37m-x86_64-linux-gnu.so postive positive

• P file-contains-trailing-whitespace
  • debian/changelog (line 588)
  • debian/changelog (line 601)
  • debian/changelog (line 644)
  • debian/changelog (line 650)
  • debian/changelog (line 686)
  • debian/changelog (line 687)
  • debian/changelog (line 702)
  • debian/changelog (line 720)
  • debian/changelog (line 742)
  • debian/changelog (line 754)
  • debian/changelog (line 759)
  • debian/changelog (line 798)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• O missing-license-paragraph-in-dep5-copyright
  • gpl-3+ (paragraph at line 7)
• O missing-license-text-in-dep5-copyright
  • GPL-3+ (paragraph at line 18)
• I out-of-date-standards-version
  • 4.1.3 (released 2017-12-27) (current is 4.2.1)
• P package-lacks-versioned-build-depends-on-debhelper
  • 9
• P package-uses-old-debhelper-compat-version
  • 9
• I testsuite-autopkgtest-missing

• P debian-watch-does-not-check-gpg-signature
• P insane-line-length-in-source-file
  • JSZip/jszip.js line length is 769 characters (>512)
• P source-contains-browserified-javascript
  • JSZip/jszip.js code fragment:if("object"==typeof exports&&"undefined"!=typeof module)module.exports=e();else if("fu
• P source-contains-prebuilt-javascript-object
  • AutoFill/js/autoFill.bootstrap.min.js
  • AutoFill/js/autoFill.foundation.min.js
  • AutoFill/js/autoFill.jqueryui.min.js
  • AutoFill/js/dataTables.autoFill.min.js
  • Buttons/js/buttons.bootstrap.min.js
  • Buttons/js/buttons.colVis.min.js
  • Buttons/js/buttons.foundation.min.js
  • Buttons/js/buttons.html5.min.js
  • Buttons/js/buttons.jqueryui.min.js
  • Buttons/js/buttons.print.min.js
  • Buttons/js/dataTables.buttons.min.js
  • ColReorder/js/dataTables.colReorder.min.js
  • FixedColumns/js/dataTables.fixedColumns.min.js
  • FixedHeader/js/dataTables.fixedHeader.min.js
  • JSZip/jszip.js line length is 769 characters (>512)
  • JSZip/jszip.min.js
  • KeyTable/js/dataTables.keyTable.min.js
  • Responsive/js/dataTables.responsive.min.js
  • RowReorder/js/dataTables.rowReorder.min.js
  • Scroller/js/dataTables.scroller.min.js
  • Select/js/dataTables.select.min.js
  • pdfmake/build/pdfmake.min.js
• O source-is-missing
  • JSZip/jszip.js line length is 769 characters (>512)
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • ftp://dicom.offis.de/pub/dicom/offis/software/dcmtk/snapshot/dcmtk-(.*)\.tar\.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 100)
  • debian/changelog (line 101)
  • debian/changelog (line 103)
  • debian/changelog (line 104)
  • debian/changelog (line 16)
  • debian/changelog (line 20)
  • debian/changelog (line 21)
  • debian/changelog (line 433)
  • debian/changelog (line 446)
  • debian/changelog (line 457)
  • debian/changelog (line 484)
  • debian/changelog (line 511)
  • debian/changelog (line 515)
  • debian/changelog (line 526)
  • debian/changelog (line 537)
  • debian/changelog (line 547)
  • debian/changelog (line 550)
  • debian/changelog (line 587)
  • debian/changelog (line 63)
  • debian/changelog (line 69)
  • debian/changelog (line 72)
  • debian/changelog (line 93)
  • debian/changelog (line 99)
  • debian/control (line 5)
  • debian/control (line 62)
  • debian/control (line 63)
  • debian/control (line 64)
  • debian/control (line 65)
  • debian/control (line 66)
  • debian/control (line 67)
  • debian/control (line 74)
  • debian/rules (line 10)
  • debian/rules (line 67)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-deprecated-source-override-location
• P package-uses-old-debhelper-compat-version
  • 9
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/git/debian-med/dcmtk.git
  • vcs-git https://anonscm.debian.org/git/debian-med/dcmtk.git

dcmtk-doc

• X duplicate-files
  • usr/share/doc/dcmtk-doc/html/search/all_1b.js usr/share/doc/dcmtk-doc/html/search/functions_1a.js

libdcmtk8

• O embedded-library
  • usr/lib/libijg12.so.8.3.6.1: libjpeg
  • usr/lib/libijg12.so.8.3.6.1: libjpeg
  • usr/lib/libijg16.so.8.3.6.1: libjpeg
  • usr/lib/libijg16.so.8.3.6.1: libjpeg
  • usr/lib/libijg8.so.8.3.6.1: libjpeg
  • usr/lib/libijg8.so.8.3.6.1: libjpeg
• I hardening-no-fortify-functions
  • usr/lib/libdcmdsig.so.8.3.6.1
  • usr/lib/libdcmdsig.so.8.3.6.1
• O no-symbols-control-file
  • usr/lib/libcmr.so.8.3.6.1
  • usr/lib/libcmr.so.8.3.6.1
  • usr/lib/libdcmdata.so.8.3.6.1
  • usr/lib/libdcmdata.so.8.3.6.1
  • usr/lib/libdcmdsig.so.8.3.6.1
  • usr/lib/libdcmdsig.so.8.3.6.1
  • usr/lib/libdcmfg.so.8.3.6.1
  • usr/lib/libdcmfg.so.8.3.6.1
  • usr/lib/libdcmimage.so.8.3.6.1
  • usr/lib/libdcmimage.so.8.3.6.1
  • usr/lib/libdcmimgle.so.8.3.6.1
  • usr/lib/libdcmimgle.so.8.3.6.1
  • usr/lib/libdcmiod.so.8.3.6.1
  • usr/lib/libdcmiod.so.8.3.6.1
  • usr/lib/libdcmjpeg.so.8.3.6.1
  • usr/lib/libdcmjpeg.so.8.3.6.1
  • usr/lib/libdcmjpls.so.8.3.6.1
  • usr/lib/libdcmjpls.so.8.3.6.1
  • usr/lib/libdcmnet.so.8.3.6.1
  • usr/lib/libdcmnet.so.8.3.6.1
  • usr/lib/libdcmpstat.so.8.3.6.1
  • usr/lib/libdcmpstat.so.8.3.6.1
  • usr/lib/libdcmqrdb.so.8.3.6.1
  • usr/lib/libdcmqrdb.so.8.3.6.1
  • usr/lib/libdcmrt.so.8.3.6.1
  • usr/lib/libdcmrt.so.8.3.6.1
  • usr/lib/libdcmseg.so.8.3.6.1
  • usr/lib/libdcmseg.so.8.3.6.1
  • usr/lib/libdcmsr.so.8.3.6.1
  • usr/lib/libdcmsr.so.8.3.6.1
  • usr/lib/libdcmtls.so.8.3.6.1
  • usr/lib/libdcmtls.so.8.3.6.1
  • usr/lib/libdcmwlm.so.8.3.6.1
  • usr/lib/libdcmwlm.so.8.3.6.1
  • usr/lib/libi2d.so.8.3.6.1
  • usr/lib/libi2d.so.8.3.6.1
  • usr/lib/libijg12.so.8.3.6.1
  • usr/lib/libijg12.so.8.3.6.1
  • usr/lib/libijg16.so.8.3.6.1
  • usr/lib/libijg16.so.8.3.6.1
  • usr/lib/libijg8.so.8.3.6.1
  • usr/lib/libijg8.so.8.3.6.1
  • usr/lib/liboflog.so.8.3.6.1
  • usr/lib/liboflog.so.8.3.6.1
  • usr/lib/libofstd.so.8.3.6.1
  • usr/lib/libofstd.so.8.3.6.1
• O package-name-doesnt-match-sonames
  • libcmr8 libdcmdata8 libdcmdsig8 libdcmfg8 libdcmimage8 libdcmimgle8 libdcmiod8 libdcmjpeg8 libdcmjpls8 libdcmnet8 libdcmpstat8 libdcmqrdb8 libdcmrt8 libdcmseg8 libdcmsr8 libdcmtls8 libdcmwlm8 libi2d8 libijg12-8 libijg16-8 libijg8-8 liboflog8 libofstd8
  • libcmr8 libdcmdata8 libdcmdsig8 libdcmfg8 libdcmimage8 libdcmimgle8 libdcmiod8 libdcmjpeg8 libdcmjpls8 libdcmnet8 libdcmpstat8 libdcmqrdb8 libdcmrt8 libdcmseg8 libdcmsr8 libdcmtls8 libdcmwlm8 libi2d8 libijg12-8 libijg16-8 libijg8-8 liboflog8 libofstd8
• X shlib-calls-exit
  • usr/lib/libdcmdata.so.8.3.6.1
  • usr/lib/libdcmdata.so.8.3.6.1
  • usr/lib/libijg12.so.8.3.6.1
  • usr/lib/libijg12.so.8.3.6.1
  • usr/lib/libijg16.so.8.3.6.1
  • usr/lib/libijg16.so.8.3.6.1
  • usr/lib/libijg8.so.8.3.6.1
  • usr/lib/libijg8.so.8.3.6.1
  • usr/lib/libofstd.so.8.3.6.1
  • usr/lib/libofstd.so.8.3.6.1
• I spelling-error-in-binary
  • usr/lib/libdcmdata.so.8.3.6.1 occured occurred
  • usr/lib/libdcmdata.so.8.3.6.1 occured occurred
  • usr/lib/libdcmimgle.so.8.3.6.1 tranformation transformation
  • usr/lib/libdcmimgle.so.8.3.6.1 tranformation transformation
  • usr/lib/libdcmiod.so.8.3.6.1 errror error
  • usr/lib/libdcmiod.so.8.3.6.1 errror error
  • usr/lib/libdcmnet.so.8.3.6.1 pres press
  • usr/lib/libdcmnet.so.8.3.6.1 pres press

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://dicom.offis.de/dicom/offis/software/dcmtk/snapshot/dcmtk-(.*)\.tar\.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 120)
  • debian/changelog (line 126)
  • debian/changelog (line 127)
  • debian/changelog (line 128)
  • debian/changelog (line 130)
  • debian/changelog (line 131)
  • debian/changelog (line 3)
  • debian/changelog (line 43)
  • debian/changelog (line 460)
  • debian/changelog (line 47)
  • debian/changelog (line 473)
  • debian/changelog (line 48)
  • debian/changelog (line 484)
  • debian/changelog (line 511)
  • debian/changelog (line 538)
  • debian/changelog (line 542)
  • debian/changelog (line 553)
  • debian/changelog (line 564)
  • debian/changelog (line 574)
  • debian/changelog (line 577)
  • debian/changelog (line 614)
  • debian/changelog (line 7)
  • debian/changelog (line 8)
  • debian/changelog (line 90)
  • debian/changelog (line 96)
  • debian/changelog (line 99)
  • debian/control (line 5)
  • debian/rules (line 10)
  • debian/rules (line 68)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-deprecated-source-override-location
• P package-uses-old-debhelper-compat-version
  • 9
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/git/debian-med/dcmtk.git
  • vcs-git https://anonscm.debian.org/git/debian-med/dcmtk.git

dcmtk-doc

• X duplicate-files
  • usr/share/doc/dcmtk-doc/html/search/all_1b.js usr/share/doc/dcmtk-doc/html/search/functions_1a.js

libdcmtk11

• O embedded-library
  • usr/lib/libijg12.so.11.3.6.1: libjpeg
  • usr/lib/libijg12.so.11.3.6.1: libjpeg
  • usr/lib/libijg16.so.11.3.6.1: libjpeg
  • usr/lib/libijg16.so.11.3.6.1: libjpeg
  • usr/lib/libijg8.so.11.3.6.1: libjpeg
  • usr/lib/libijg8.so.11.3.6.1: libjpeg
• I hardening-no-fortify-functions
  • usr/lib/libdcmdsig.so.11.3.6.1
  • usr/lib/libdcmdsig.so.11.3.6.1
• O no-symbols-control-file
  • usr/lib/libcmr.so.11.3.6.1
  • usr/lib/libcmr.so.11.3.6.1
  • usr/lib/libdcmdata.so.11.3.6.1
  • usr/lib/libdcmdata.so.11.3.6.1
  • usr/lib/libdcmdsig.so.11.3.6.1
  • usr/lib/libdcmdsig.so.11.3.6.1
  • usr/lib/libdcmfg.so.11.3.6.1
  • usr/lib/libdcmfg.so.11.3.6.1
  • usr/lib/libdcmimage.so.11.3.6.1
  • usr/lib/libdcmimage.so.11.3.6.1
  • usr/lib/libdcmimgle.so.11.3.6.1
  • usr/lib/libdcmimgle.so.11.3.6.1
  • usr/lib/libdcmiod.so.11.3.6.1
  • usr/lib/libdcmiod.so.11.3.6.1
  • usr/lib/libdcmjpeg.so.11.3.6.1
  • usr/lib/libdcmjpeg.so.11.3.6.1
  • usr/lib/libdcmjpls.so.11.3.6.1
  • usr/lib/libdcmjpls.so.11.3.6.1
  • usr/lib/libdcmnet.so.11.3.6.1
  • usr/lib/libdcmnet.so.11.3.6.1
  • usr/lib/libdcmpmap.so.11.3.6.1
  • usr/lib/libdcmpmap.so.11.3.6.1
  • usr/lib/libdcmpstat.so.11.3.6.1
  • usr/lib/libdcmpstat.so.11.3.6.1
  • usr/lib/libdcmqrdb.so.11.3.6.1
  • usr/lib/libdcmqrdb.so.11.3.6.1
  • usr/lib/libdcmrt.so.11.3.6.1
  • usr/lib/libdcmrt.so.11.3.6.1
  • usr/lib/libdcmseg.so.11.3.6.1
  • usr/lib/libdcmseg.so.11.3.6.1
  • usr/lib/libdcmsr.so.11.3.6.1
  • usr/lib/libdcmsr.so.11.3.6.1
  • usr/lib/libdcmtls.so.11.3.6.1
  • usr/lib/libdcmtls.so.11.3.6.1
  • usr/lib/libdcmtract.so.11.3.6.1
  • usr/lib/libdcmtract.so.11.3.6.1
  • usr/lib/libdcmwlm.so.11.3.6.1
  • usr/lib/libdcmwlm.so.11.3.6.1
  • usr/lib/libi2d.so.11.3.6.1
  • usr/lib/libi2d.so.11.3.6.1
  • usr/lib/libijg12.so.11.3.6.1
  • usr/lib/libijg12.so.11.3.6.1
  • usr/lib/libijg16.so.11.3.6.1
  • usr/lib/libijg16.so.11.3.6.1
  • usr/lib/libijg8.so.11.3.6.1
  • usr/lib/libijg8.so.11.3.6.1
  • usr/lib/liboflog.so.11.3.6.1
  • usr/lib/liboflog.so.11.3.6.1
  • usr/lib/libofstd.so.11.3.6.1
  • usr/lib/libofstd.so.11.3.6.1
• O package-name-doesnt-match-sonames
  • libcmr11 libdcmdata11 libdcmdsig11 libdcmfg11 libdcmimage11 libdcmimgle11 libdcmiod11 libdcmjpeg11 libdcmjpls11 libdcmnet11 libdcmpmap11 libdcmpstat11 libdcmqrdb11 libdcmrt11 libdcmseg11 libdcmsr11 libdcmtls11 libdcmtract11 libdcmwlm11 libi2d11 libijg12-11 libijg16-11 libijg8-11 liboflog11 libofstd11
  • libcmr11 libdcmdata11 libdcmdsig11 libdcmfg11 libdcmimage11 libdcmimgle11 libdcmiod11 libdcmjpeg11 libdcmjpls11 libdcmnet11 libdcmpmap11 libdcmpstat11 libdcmqrdb11 libdcmrt11 libdcmseg11 libdcmsr11 libdcmtls11 libdcmtract11 libdcmwlm11 libi2d11 libijg12-11 libijg16-11 libijg8-11 liboflog11 libofstd11
• X shlib-calls-exit
  • usr/lib/libdcmdata.so.11.3.6.1
  • usr/lib/libdcmdata.so.11.3.6.1
  • usr/lib/libijg12.so.11.3.6.1
  • usr/lib/libijg12.so.11.3.6.1
  • usr/lib/libijg16.so.11.3.6.1
  • usr/lib/libijg16.so.11.3.6.1
  • usr/lib/libijg8.so.11.3.6.1
  • usr/lib/libijg8.so.11.3.6.1
  • usr/lib/libofstd.so.11.3.6.1
  • usr/lib/libofstd.so.11.3.6.1
• I spelling-error-in-binary
  • usr/lib/libdcmdata.so.11.3.6.1 occured occurred
  • usr/lib/libdcmdata.so.11.3.6.1 occured occurred
  • usr/lib/libdcmimgle.so.11.3.6.1 tranformation transformation
  • usr/lib/libdcmimgle.so.11.3.6.1 tranformation transformation
  • usr/lib/libdcmnet.so.11.3.6.1 pres press
  • usr/lib/libdcmnet.so.11.3.6.1 pres press

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://dicom.offis.de/dicom/offis/software/dcmtk/dcmtk362/dcmtk-(.*)\.tar\.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 126)
  • debian/changelog (line 132)
  • debian/changelog (line 135)
  • debian/changelog (line 156)
  • debian/changelog (line 162)
  • debian/changelog (line 163)
  • debian/changelog (line 164)
  • debian/changelog (line 166)
  • debian/changelog (line 167)
  • debian/changelog (line 28)
  • debian/changelog (line 39)
  • debian/changelog (line 43)
  • debian/changelog (line 44)
  • debian/changelog (line 496)
  • debian/changelog (line 509)
  • debian/changelog (line 520)
  • debian/changelog (line 547)
  • debian/changelog (line 574)
  • debian/changelog (line 578)
  • debian/changelog (line 589)
  • debian/changelog (line 600)
  • debian/changelog (line 610)
  • debian/changelog (line 613)
  • debian/changelog (line 650)
  • debian/changelog (line 79)
  • debian/changelog (line 83)
  • debian/changelog (line 84)
  • debian/control (line 4)
  • debian/rules (line 10)
  • debian/rules (line 69)
  • debian/rules (line 70)
  • debian/rules (line 80)
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-uses-deprecated-source-override-location
• P package-uses-old-debhelper-compat-version
  • 9
• W patch-file-present-but-not-mentioned-in-series
  • 09_round_time.patch
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/git/debian-med/dcmtk.git
  • vcs-git https://anonscm.debian.org/git/debian-med/dcmtk.git

dcmtk (3.6.2-3+b1; main)

• X binary-file-built-without-LFS-support
  • usr/bin/dcm2pdf
  • usr/bin/dcm2pnm
  • usr/bin/dcmftest
  • usr/bin/dcmj2pnm
  • usr/bin/dcml2pnm
  • usr/bin/dcmmklut
  • usr/bin/dcmp2pgm
  • usr/bin/dcmprscp
  • usr/bin/dcmprscu
  • usr/bin/dcmpsprt
  • usr/bin/dcmpsrcv
  • usr/bin/dcmpssnd
  • usr/bin/dcmsign
  • usr/bin/dump2dcm
  • usr/bin/pdf2dcm
  • usr/bin/storescp
  • usr/bin/xml2dcm
• I hardening-no-fortify-functions
  • usr/bin/dcmftest
  • usr/bin/dcmftest
  • usr/bin/dump2dcm
  • usr/bin/dump2dcm
• W maintainer-script-should-not-use-recursive-chown-or-chmod
  • postinst:20
  • postinst:20
• I package-contains-documentation-outside-usr-share-doc
  • usr/share/dcmtk/wlistdb/README
  • usr/share/dcmtk/wlistdb/README
  • usr/share/dcmtk/wlistqry/README
  • usr/share/dcmtk/wlistqry/README
• I spelling-error-in-binary
  • usr/bin/dcmcjpls threshhold threshold
  • usr/bin/dcmcjpls threshhold threshold
  • usr/bin/dcmodify occurences occurrences
  • usr/bin/dcmodify occurences occurrences
  • usr/bin/dcmprscu occured occurred
  • usr/bin/dcmprscu occured occurred
  • usr/bin/dcmpsmk additonal additional
  • usr/bin/dcmpsmk additonal additional
  • usr/bin/dcmpsprt pres press
  • usr/bin/dcmpsprt pres press
  • usr/bin/storescu pres press
  • usr/bin/storescu pres press
• I spelling-error-in-manpage
  • usr/share/man/man1/dcmcjpeg.1.gz truely truly
  • usr/share/man/man1/dcmcjpeg.1.gz truely truly
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmp2pgm.1.gz allows to allows one to
  • usr/share/man/man1/dcmp2pgm.1.gz allows to allows one to
  • usr/share/man/man1/dcmprscp.1.gz allows to allows one to
  • usr/share/man/man1/dcmprscp.1.gz allows to allows one to
  • usr/share/man/man1/dcmpsmk.1.gz allow to allow one to
  • usr/share/man/man1/dcmpsmk.1.gz allow to allow one to

dcmtk-doc

• X duplicate-files
  • usr/share/doc/dcmtk-doc/html/search/all_1b.js usr/share/doc/dcmtk-doc/html/search/functions_1a.js

libdcmtk12 (3.6.2-3+b1; main)

• X binary-file-built-without-LFS-support
  • usr/lib/libdcmdata.so.12.3.6.2
  • usr/lib/libdcmimgle.so.12.3.6.2
  • usr/lib/libdcmnet.so.12.3.6.2
  • usr/lib/libdcmpstat.so.12.3.6.2
  • usr/lib/libdcmqrdb.so.12.3.6.2
  • usr/lib/libdcmwlm.so.12.3.6.2
  • usr/lib/liboflog.so.12.3.6.2
  • usr/lib/libofstd.so.12.3.6.2
• O embedded-library
  • usr/lib/libijg12.so.12.3.6.2: libjpeg
  • usr/lib/libijg12.so.12.3.6.2: libjpeg
  • usr/lib/libijg16.so.12.3.6.2: libjpeg
  • usr/lib/libijg16.so.12.3.6.2: libjpeg
  • usr/lib/libijg8.so.12.3.6.2: libjpeg
  • usr/lib/libijg8.so.12.3.6.2: libjpeg
• I hardening-no-fortify-functions
  • usr/lib/libdcmdsig.so.12.3.6.2
  • usr/lib/libdcmdsig.so.12.3.6.2
• O no-symbols-control-file
  • usr/lib/libcmr.so.12.3.6.2
  • usr/lib/libcmr.so.12.3.6.2
  • usr/lib/libdcmdata.so.12.3.6.2
  • usr/lib/libdcmdata.so.12.3.6.2
  • usr/lib/libdcmdsig.so.12.3.6.2
  • usr/lib/libdcmdsig.so.12.3.6.2
  • usr/lib/libdcmfg.so.12.3.6.2
  • usr/lib/libdcmfg.so.12.3.6.2
  • usr/lib/libdcmimage.so.12.3.6.2
  • usr/lib/libdcmimage.so.12.3.6.2
  • usr/lib/libdcmimgle.so.12.3.6.2
  • usr/lib/libdcmimgle.so.12.3.6.2
  • usr/lib/libdcmiod.so.12.3.6.2
  • usr/lib/libdcmiod.so.12.3.6.2
  • usr/lib/libdcmjpeg.so.12.3.6.2
  • usr/lib/libdcmjpeg.so.12.3.6.2
  • usr/lib/libdcmjpls.so.12.3.6.2
  • usr/lib/libdcmjpls.so.12.3.6.2
  • usr/lib/libdcmnet.so.12.3.6.2
  • usr/lib/libdcmnet.so.12.3.6.2
  • usr/lib/libdcmpmap.so.12.3.6.2
  • usr/lib/libdcmpmap.so.12.3.6.2
  • usr/lib/libdcmpstat.so.12.3.6.2
  • usr/lib/libdcmpstat.so.12.3.6.2
  • usr/lib/libdcmqrdb.so.12.3.6.2
  • usr/lib/libdcmqrdb.so.12.3.6.2
  • usr/lib/libdcmrt.so.12.3.6.2
  • usr/lib/libdcmrt.so.12.3.6.2
  • usr/lib/libdcmseg.so.12.3.6.2
  • usr/lib/libdcmseg.so.12.3.6.2
  • usr/lib/libdcmsr.so.12.3.6.2
  • usr/lib/libdcmsr.so.12.3.6.2
  • usr/lib/libdcmtls.so.12.3.6.2
  • usr/lib/libdcmtls.so.12.3.6.2
  • usr/lib/libdcmtract.so.12.3.6.2
  • usr/lib/libdcmtract.so.12.3.6.2
  • usr/lib/libdcmwlm.so.12.3.6.2
  • usr/lib/libdcmwlm.so.12.3.6.2
  • usr/lib/libi2d.so.12.3.6.2
  • usr/lib/libi2d.so.12.3.6.2
  • usr/lib/libijg12.so.12.3.6.2
  • usr/lib/libijg12.so.12.3.6.2
  • usr/lib/libijg16.so.12.3.6.2
  • usr/lib/libijg16.so.12.3.6.2
  • usr/lib/libijg8.so.12.3.6.2
  • usr/lib/libijg8.so.12.3.6.2
  • usr/lib/liboflog.so.12.3.6.2
  • usr/lib/liboflog.so.12.3.6.2
  • usr/lib/libofstd.so.12.3.6.2
  • usr/lib/libofstd.so.12.3.6.2
• O package-name-doesnt-match-sonames
  • libcmr12 libdcmdata12 libdcmdsig12 libdcmfg12 libdcmimage12 libdcmimgle12 libdcmiod12 libdcmjpeg12 libdcmjpls12 libdcmnet12 libdcmpmap12 libdcmpstat12 libdcmqrdb12 libdcmrt12 libdcmseg12 libdcmsr12 libdcmtls12 libdcmtract12 libdcmwlm12 libi2d12 libijg12-12 libijg16-12 libijg8-12 liboflog12 libofstd12
  • libcmr12 libdcmdata12 libdcmdsig12 libdcmfg12 libdcmimage12 libdcmimgle12 libdcmiod12 libdcmjpeg12 libdcmjpls12 libdcmnet12 libdcmpmap12 libdcmpstat12 libdcmqrdb12 libdcmrt12 libdcmseg12 libdcmsr12 libdcmtls12 libdcmtract12 libdcmwlm12 libi2d12 libijg12-12 libijg16-12 libijg8-12 liboflog12 libofstd12
• X shlib-calls-exit
  • usr/lib/libdcmdata.so.12.3.6.2
  • usr/lib/libdcmdata.so.12.3.6.2
  • usr/lib/libijg12.so.12.3.6.2
  • usr/lib/libijg12.so.12.3.6.2
  • usr/lib/libijg16.so.12.3.6.2
  • usr/lib/libijg16.so.12.3.6.2
  • usr/lib/libijg8.so.12.3.6.2
  • usr/lib/libijg8.so.12.3.6.2
  • usr/lib/libofstd.so.12.3.6.2
  • usr/lib/libofstd.so.12.3.6.2
• I spelling-error-in-binary
  • usr/lib/libdcmdata.so.12.3.6.2 occured occurred
  • usr/lib/libdcmdata.so.12.3.6.2 occured occurred
  • usr/lib/libdcmimgle.so.12.3.6.2 tranformation transformation
  • usr/lib/libdcmimgle.so.12.3.6.2 tranformation transformation
  • usr/lib/libdcmnet.so.12.3.6.2 pres press
  • usr/lib/libdcmnet.so.12.3.6.2 pres press

• I debian-rules-contains-unnecessary-get-orig-source-target
• P debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • ftp://dicom.offis.de/pub/dicom/offis/software/dcmtk/current/dcmtk-(.*)\.tar\.gz
• P file-contains-trailing-whitespace
  • debian/changelog (line 140)
  • debian/changelog (line 146)
  • debian/changelog (line 149)
  • debian/changelog (line 170)
  • debian/changelog (line 176)
  • debian/changelog (line 177)
  • debian/changelog (line 178)
  • debian/changelog (line 180)
  • debian/changelog (line 181)
  • debian/changelog (line 42)
  • debian/changelog (line 510)
  • debian/changelog (line 523)
  • debian/changelog (line 53)
  • debian/changelog (line 534)
  • debian/changelog (line 561)
  • debian/changelog (line 57)
  • debian/changelog (line 58)
  • debian/changelog (line 588)
  • debian/changelog (line 592)
  • debian/changelog (line 603)
  • debian/changelog (line 614)
  • debian/changelog (line 624)
  • debian/changelog (line 627)
  • debian/changelog (line 664)
  • debian/changelog (line 93)
  • debian/changelog (line 97)
  • debian/changelog (line 98)
  • debian/control (line 4)
  • debian/rules (line 10)
  • debian/rules (line 67)
  • debian/rules (line 68)
  • debian/rules (line 78)
• I out-of-date-standards-version
  • 4.1.5 (released 2018-07-04) (current is 4.2.1)
• P package-uses-deprecated-source-override-location
• P package-uses-old-debhelper-compat-version
  • 9
• W patch-file-present-but-not-mentioned-in-series
  • 09_round_time.patch
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing
• I wildcard-matches-nothing-in-dep5-copyright
  • dcmsr/include/dcmtk/dcmsr/cmr/dsrdnflt.h (paragraph at line 399)
  • dcmsr/include/dcmtk/dcmsr/cmr/dsritcsr.h (paragraph at line 399)
  • dcmsr/include/dcmtk/dcmsr/cmr/dsritcsr.h (paragraph at line 399)
  • dcmsr/include/dcmtk/dcmsr/cmr/dsrprdcc.h (paragraph at line 399)
  • dcmsr/libcmr/dsrdnflt.cc (paragraph at line 399)
  • dcmsr/libcmr/dsritcsr.cc (paragraph at line 399)
  • dcmsr/libcmr/dsritcsr.cc (paragraph at line 399)
  • dcmsr/libcmr/dsrprdcc.cc (paragraph at line 399)
  • dcmsr/libcmr/tid300cc.cc (paragraph at line 399)

dcmtk

• X binary-file-built-without-LFS-support
  • usr/bin/dcm2pdf
  • usr/bin/dcm2pnm
  • usr/bin/dcmftest
  • usr/bin/dcmj2pnm
  • usr/bin/dcml2pnm
  • usr/bin/dcmmklut
  • usr/bin/dcmp2pgm
  • usr/bin/dcmprscp
  • usr/bin/dcmprscu
  • usr/bin/dcmpsprt
  • usr/bin/dcmpsrcv
  • usr/bin/dcmpssnd
  • usr/bin/dcmsign
  • usr/bin/dump2dcm
  • usr/bin/pdf2dcm
  • usr/bin/storescp
  • usr/bin/xml2dcm
• I hardening-no-fortify-functions
  • usr/bin/dcmftest
  • usr/bin/dcmftest
  • usr/bin/dump2dcm
  • usr/bin/dump2dcm
• W maintainer-script-should-not-use-recursive-chown-or-chmod
  • postinst:20
  • postinst:20
• I spelling-error-in-binary
  • usr/bin/dcmcjpls threshhold threshold
  • usr/bin/dcmcjpls threshhold threshold
  • usr/bin/dcmodify occurences occurrences
  • usr/bin/dcmodify occurences occurrences
  • usr/bin/dcmprscu occured occurred
  • usr/bin/dcmprscu occured occurred
  • usr/bin/dcmpsmk additonal additional
  • usr/bin/dcmpsmk additonal additional
  • usr/bin/dcmpsprt pres press
  • usr/bin/dcmpsprt pres press
  • usr/bin/storescu pres press
  • usr/bin/storescu pres press
• I spelling-error-in-manpage
  • usr/share/man/man1/dcmcjpeg.1.gz truely truly
  • usr/share/man/man1/dcmcjpeg.1.gz truely truly
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmcjpls.1.gz threshhold threshold
  • usr/share/man/man1/dcmp2pgm.1.gz allows to allows one to
  • usr/share/man/man1/dcmp2pgm.1.gz allows to allows one to
  • usr/share/man/man1/dcmprscp.1.gz allows to allows one to
  • usr/share/man/man1/dcmprscp.1.gz allows to allows one to
  • usr/share/man/man1/dcmpsmk.1.gz allow to allow one to
  • usr/share/man/man1/dcmpsmk.1.gz allow to allow one to

dcmtk-doc

• X duplicate-files
  • usr/share/doc/dcmtk-doc/html/search/all_1b.js usr/share/doc/dcmtk-doc/html/search/functions_1a.js

libdcmtk13

• X binary-file-built-without-LFS-support
  • usr/lib/i386-linux-gnu/libdcmdata.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmimgle.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmnet.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmpstat.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmqrdb.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmwlm.so.13.3.6.3
  • usr/lib/i386-linux-gnu/liboflog.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libofstd.so.13.3.6.3
• O embedded-library
  • usr/lib/i386-linux-gnu/libijg12.so.13.3.6.3: libjpeg
  • usr/lib/i386-linux-gnu/libijg16.so.13.3.6.3: libjpeg
  • usr/lib/i386-linux-gnu/libijg8.so.13.3.6.3: libjpeg
  • usr/lib/x86_64-linux-gnu/libijg12.so.13.3.6.3: libjpeg
  • usr/lib/x86_64-linux-gnu/libijg16.so.13.3.6.3: libjpeg
  • usr/lib/x86_64-linux-gnu/libijg8.so.13.3.6.3: libjpeg
• I hardening-no-fortify-functions
  • usr/lib/i386-linux-gnu/libdcmdsig.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmtls.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmdsig.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmtls.so.13.3.6.3
• O no-symbols-control-file
  • usr/lib/i386-linux-gnu/libcmr.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmdata.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmdsig.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmfg.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmimage.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmimgle.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmiod.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmjpeg.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmjpls.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmnet.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmpmap.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmpstat.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmqrdb.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmrt.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmseg.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmsr.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmtls.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmtract.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libdcmwlm.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libi2d.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libijg12.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libijg16.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libijg8.so.13.3.6.3
  • usr/lib/i386-linux-gnu/liboflog.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libofstd.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libcmr.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmdata.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmdsig.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmfg.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmimage.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmimgle.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmiod.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmjpeg.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmjpls.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmnet.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmpmap.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmpstat.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmqrdb.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmrt.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmseg.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmsr.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmtls.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmtract.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmwlm.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libi2d.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libijg12.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libijg16.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libijg8.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/liboflog.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libofstd.so.13.3.6.3
• O package-name-doesnt-match-sonames
  • libcmr13 libdcmdata13 libdcmdsig13 libdcmfg13 libdcmimage13 libdcmimgle13 libdcmiod13 libdcmjpeg13 libdcmjpls13 libdcmnet13 libdcmpmap13 libdcmpstat13 libdcmqrdb13 libdcmrt13 libdcmseg13 libdcmsr13 libdcmtls13 libdcmtract13 libdcmwlm13 libi2d13 libijg12-13 libijg16-13 libijg8-13 liboflog13 libofstd13
  • libcmr13 libdcmdata13 libdcmdsig13 libdcmfg13 libdcmimage13 libdcmimgle13 libdcmiod13 libdcmjpeg13 libdcmjpls13 libdcmnet13 libdcmpmap13 libdcmpstat13 libdcmqrdb13 libdcmrt13 libdcmseg13 libdcmsr13 libdcmtls13 libdcmtract13 libdcmwlm13 libi2d13 libijg12-13 libijg16-13 libijg8-13 liboflog13 libofstd13
• X shlib-calls-exit
  • usr/lib/i386-linux-gnu/libdcmdata.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libijg12.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libijg16.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libijg8.so.13.3.6.3
  • usr/lib/i386-linux-gnu/libofstd.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libdcmdata.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libijg12.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libijg16.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libijg8.so.13.3.6.3
  • usr/lib/x86_64-linux-gnu/libofstd.so.13.3.6.3
• I spelling-error-in-binary
  • usr/lib/i386-linux-gnu/libdcmnet.so.13.3.6.3 pres press
  • usr/lib/x86_64-linux-gnu/libdcmnet.so.13.3.6.3 pres press

• P file-contains-trailing-whitespace
  • debian/control (line 482)
• W no-op-testsuite
• P package-does-not-use-debhelper-or-cdbs

• P file-contains-trailing-whitespace
  • debian/changelog (line 22)
  • debian/changelog (line 23)
  • debian/control (line 512)
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/
• P package-does-not-use-debhelper-or-cdbs
• I testsuite-autopkgtest-missing

junior-art

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Art"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-config

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Project common package"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/
• P maintainer-script-without-set-e
  • config
  • postinst
• I unused-debconf-template
  • shared/junior-config/usermenus

junior-education

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. education applications"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-adventure

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Adventure Games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-arcade

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. arcade games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-card

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Card Games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-gl

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. 3D Games (hardware acceleration required)"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-net

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Network Games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-puzzle

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Puzzle games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-sim

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Simulation Games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-games-text

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Text Games"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-internet

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Internet tools"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-math

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. educational math"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-programming

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. programming"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-sound

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. sound"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-system

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. System tools"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-tasks

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. tasks for tasksel"
• I extended-description-is-probably-too-short
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-toys

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. desktop toys"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-typing

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. typing"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-video

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. Video"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

junior-writing

• I description-synopsis-might-not-be-phrased-properly
  • "Debian Jr. writing"
• P homepage-field-uses-insecure-uri
  • http://blends.debian.org/junior/tasks/

• P file-contains-trailing-whitespace
  • debian/changelog (line 11)
  • debian/changelog (line 12)
  • debian/changelog (line 198)
  • debian/changelog (line 199)
  • debian/changelog (line 272)
  • debian/changelog (line 273)
  • debian/changelog (line 497)
  • debian/changelog (line 50)
  • debian/changelog (line 51)
  • debian/changelog (line 548)
  • debian/changelog (line 757)
  • debian/changelog (line 792)
  • debian/changelog (line 80)
  • debian/changelog (line 809)
  • debian/changelog (line 81)
  • debian/changelog (line 838)
  • debian/changelog (line 852)
  • debian/control (line 1620)
• P no-dep5-copyright
• P package-does-not-use-debhelper-or-cdbs
• I testsuite-autopkgtest-missing
• W vcs-obsolete-in-debian-infrastructure
  • vcs-browser https://anonscm.debian.org/cgit/blends/projects/med.git
  • vcs-git https://anonscm.debian.org/git/blends/projects/med.git

med-rehabilitation

• W priority-extra-is-replaced-by-priority-optional

• P file-contains-trailing-whitespace
  • debian/changelog (line 212)
  • debian/changelog (line 213)
  • debian/changelog (line 25)
  • debian/changelog (line 26)
  • debian/changelog (line 286)
  • debian/changelog (line 287)
  • debian/changelog (line 511)
  • debian/changelog (line 562)
  • debian/changelog (line 64)
  • debian/changelog (line 65)
  • debian/changelog (line 771)
  • debian/changelog (line 806)
  • debian/changelog (line 823)
  • debian/changelog (line 852)
  • debian/changelog (line 866)
  • debian/changelog (line 94)
  • debian/changelog (line 95)
  • debian/control (line 1684)
• P no-dep5-copyright
• P package-does-not-use-debhelper-or-cdbs
• I testsuite-autopkgtest-missing

med-config

• P maintainer-script-without-set-e
  • config
  • postinst
• I unused-debconf-template
  • shared/med-config/usermenus

med-epi

• O description-possibly-contains-homepage
  • http://staff.pubhealth.ku.dk/%7Ebxc/Epi/R-intro.pdf

med-tasks

• O description-possibly-contains-homepage
  • http://debian-med.alioth.debian.org/tasks/

• P file-contains-trailing-whitespace
  • debian/changelog (line 134)
  • debian/changelog (line 145)
  • debian/changelog (line 147)
  • debian/changelog (line 148)
  • debian/changelog (line 30)
  • debian/changelog (line 31)
  • debian/changelog (line 406)
  • debian/changelog (line 407)
  • debian/changelog (line 709)
  • debian/changelog (line 710)
  • debian/changelog (line 848)
  • debian/changelog (line 849)
  • debian/control (line 2818)
• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/
• P insecure-copyright-format-uri
  • http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
• P package-does-not-use-debhelper-or-cdbs
• I testsuite-autopkgtest-missing

science-all

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-astronomy

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-astronomy-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-biology

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-chemistry

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-config

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/
• P maintainer-script-without-set-e
  • config
  • postinst
• I unused-debconf-template
  • shared/science-config/usermenus

science-dataacquisition

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-dataacquisition-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-distributedcomputing

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-economics

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-electronics

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-electrophysiology

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-engineering

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-engineering-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-financial

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-geography

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-geometry

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-highenergy-physics

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-highenergy-physics-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-imageanalysis

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-imageanalysis-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-linguistics

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-logic

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-machine-learning

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-mathematics

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-mathematics-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-meteorology

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-meteorology-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-nanoscale-physics

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-nanoscale-physics-dev

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-neuroscience-cognitive

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/

science-neuroscience-modeling

• P homepage-field-uses-insecure-uri
  • http://wiki.debian.org/DebianScience/