Debian Med Packaging Team

At the time of the last Lintian run, the following possible problems were found in packages maintained by Debian Med Packaging Team <debian-med-packaging@alioth-lists.debian.net>, listed by source package. See also the report showing only errors and warnings. Also see their QA overview.

• I binary-control-field-duplicates-source
  • field "section" in package mrtrix3
• W debian-rules-sets-dpkg-architecture-variable
  • DEB_HOST_ARCH (line 17)
• X debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://github.com/MRtrix3/mrtrix3/releases
• P file-contains-trailing-whitespace
  • debian/rules (line 11)
• P hyphen-in-upstream-part-of-debian-changelog-version
  • 3.0~rc3+git135-g2b8e7d0c2
• I out-of-date-standards-version
  • 4.2.1 (released 2018-08-25) (current is 4.4.0)
• I override_dh_auto_test-does-not-check-DEB_BUILD_OPTIONS
  • (line 46)
• P package-uses-old-debhelper-compat-version
  • 9
• I quilt-patch-missing-description
  • deb_run_tests
  • up_blend_python
• P rules-requires-root-missing
• I testsuite-autopkgtest-missing
• X upstream-metadata-file-is-missing

mrtrix3

• X binary-file-built-without-LFS-support
  • usr/lib/mrtrix3/bin/connectome2tck
  • usr/lib/mrtrix3/bin/connectomestats
  • usr/lib/mrtrix3/bin/fixel2sh
  • usr/lib/mrtrix3/bin/fixel2tsf
  • usr/lib/mrtrix3/bin/fixel2voxel
  • usr/lib/mrtrix3/bin/fixelcfestats
  • usr/lib/mrtrix3/bin/fixelconvert
  • usr/lib/mrtrix3/bin/fixelcorrespondence
  • usr/lib/mrtrix3/bin/fixelcrop
  • usr/lib/mrtrix3/bin/fixelreorient
  • usr/lib/mrtrix3/bin/fod2fixel
  • usr/lib/mrtrix3/bin/mrregister
  • usr/lib/mrtrix3/bin/mrview
  • usr/lib/mrtrix3/bin/mtnormalise
  • usr/lib/mrtrix3/bin/tck2fixel
  • usr/lib/mrtrix3/bin/tckconvert
  • usr/lib/mrtrix3/bin/tckdfc
  • usr/lib/mrtrix3/bin/tckedit
  • usr/lib/mrtrix3/bin/tckgen
  • usr/lib/mrtrix3/bin/tckglobal
  • usr/lib/mrtrix3/bin/tckmap
  • usr/lib/mrtrix3/bin/tckresample
  • usr/lib/mrtrix3/bin/tcksample
  • usr/lib/mrtrix3/bin/tcksift
  • usr/lib/mrtrix3/bin/tcksift2
  • usr/lib/mrtrix3/bin/tcktransform
  • usr/lib/mrtrix3/bin/tsfdivide
  • usr/lib/mrtrix3/bin/tsfmult
  • usr/lib/mrtrix3/bin/tsfsmooth
  • usr/lib/mrtrix3/bin/tsfthreshold
  • usr/lib/mrtrix3/bin/vectorstats
  • usr/lib/mrtrix3/bin/voxel2fixel
  • usr/lib/mrtrix3/bin/warp2metric
  • usr/lib/mrtrix3/lib/libmrtrix.so
• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• I desktop-entry-contains-encoding-key
  • usr/share/applications/mrtrix3.desktop:2 Encoding
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/mrtrix3.desktop
• I hardening-no-fortify-functions
  • usr/lib/mrtrix3/bin/dcminfo
  • usr/lib/mrtrix3/bin/dirmerge
  • usr/lib/mrtrix3/bin/fixel2sh
  • usr/lib/mrtrix3/bin/fixel2tsf
  • usr/lib/mrtrix3/bin/fixel2voxel
  • usr/lib/mrtrix3/bin/fixelcfestats
  • usr/lib/mrtrix3/bin/fixelconvert
  • usr/lib/mrtrix3/bin/fixelcorrespondence
  • usr/lib/mrtrix3/bin/fixelcrop
  • usr/lib/mrtrix3/bin/fixelreorient
  • usr/lib/mrtrix3/bin/fod2fixel
  • usr/lib/mrtrix3/bin/label2mesh
  • usr/lib/mrtrix3/bin/mesh2voxel
  • usr/lib/mrtrix3/bin/meshconvert
  • usr/lib/mrtrix3/bin/meshfilter
  • usr/lib/mrtrix3/bin/mrinfo
  • usr/lib/mrtrix3/bin/mrview
  • usr/lib/mrtrix3/bin/tck2fixel
  • usr/lib/mrtrix3/bin/tckedit
  • usr/lib/mrtrix3/bin/tckgen
  • usr/lib/mrtrix3/bin/tckglobal
  • usr/lib/mrtrix3/bin/tcksift
  • usr/lib/mrtrix3/bin/tcksift2
  • usr/lib/mrtrix3/bin/voxel2fixel
  • usr/lib/mrtrix3/bin/voxel2mesh
  • usr/lib/mrtrix3/bin/warp2metric
  • usr/lib/mrtrix3/lib/libmrtrix.so
• P image-file-in-usr-lib
  • usr/lib/mrtrix3/icons/desktop/128x128/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/16x16/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/32x32/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/48x48/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/64x64/mrtrix.png
  • usr/lib/mrtrix3/icons/mrtrix.png
• P script-uses-unversioned-python-in-shebang
  • usr/lib/mrtrix3/bin/5ttgen
  • usr/lib/mrtrix3/bin/average_response
  • usr/lib/mrtrix3/bin/blend
  • usr/lib/mrtrix3/bin/convert_bruker
  • usr/lib/mrtrix3/bin/dwi2response
  • usr/lib/mrtrix3/bin/dwibiascorrect
  • usr/lib/mrtrix3/bin/dwigradcheck
  • usr/lib/mrtrix3/bin/dwiintensitynorm
  • usr/lib/mrtrix3/bin/dwipreproc
  • usr/lib/mrtrix3/bin/labelsgmfix
  • usr/lib/mrtrix3/bin/population_template
• I spelling-error-in-binary
  • usr/lib/mrtrix3/bin/label2mesh suppport support
  • usr/lib/mrtrix3/bin/mesh2voxel suppport support
  • usr/lib/mrtrix3/bin/meshconvert suppport support
  • usr/lib/mrtrix3/bin/meshfilter suppport support
  • usr/lib/mrtrix3/bin/mrcalc exising existing
  • usr/lib/mrtrix3/bin/mredit instad instead
  • usr/lib/mrtrix3/bin/mrregister tage stage
  • usr/lib/mrtrix3/bin/mrregister tranformed transformed
  • usr/lib/mrtrix3/bin/mrview lik link
  • usr/lib/mrtrix3/bin/mrview mappping mapping
  • usr/lib/mrtrix3/bin/mrview ment meant
  • usr/lib/mrtrix3/bin/mrview suppport support
  • usr/lib/mrtrix3/bin/mtnormalise accomodate accommodate
  • usr/lib/mrtrix3/bin/shview lik link
  • usr/lib/mrtrix3/bin/shview ment meant
  • usr/lib/mrtrix3/bin/tckconvert Broser Browser
  • usr/lib/mrtrix3/bin/tckgen mor more
  • usr/lib/mrtrix3/bin/tckinfo mor more
  • usr/lib/mrtrix3/bin/tckmap mappping mapping
  • usr/lib/mrtrix3/bin/tcksift performace performance
  • usr/lib/mrtrix3/bin/tcksift2 mor more
  • usr/lib/mrtrix3/bin/tcksift2 performace performance
  • usr/lib/mrtrix3/bin/transformcompose seperately separately
  • usr/lib/mrtrix3/bin/transformconvert "allows to" "allows one to"
  • usr/lib/mrtrix3/bin/voxel2mesh suppport support
• X dependency-on-python-version-marked-for-end-of-life
  • (Depends: python)
• I desktop-entry-contains-encoding-key
  • usr/share/applications/mrtrix3.desktop:2 Encoding
• I desktop-entry-lacks-keywords-entry
  • usr/share/applications/mrtrix3.desktop
• I hardening-no-fortify-functions
  • usr/lib/mrtrix3/bin/dcminfo
  • usr/lib/mrtrix3/bin/dirmerge
  • usr/lib/mrtrix3/bin/fixel2sh
  • usr/lib/mrtrix3/bin/fixel2tsf
  • usr/lib/mrtrix3/bin/fixel2voxel
  • usr/lib/mrtrix3/bin/fixelcfestats
  • usr/lib/mrtrix3/bin/fixelconvert
  • usr/lib/mrtrix3/bin/fixelcorrespondence
  • usr/lib/mrtrix3/bin/fixelcrop
  • usr/lib/mrtrix3/bin/fixelreorient
  • usr/lib/mrtrix3/bin/fod2fixel
  • usr/lib/mrtrix3/bin/label2mesh
  • usr/lib/mrtrix3/bin/mesh2voxel
  • usr/lib/mrtrix3/bin/meshconvert
  • usr/lib/mrtrix3/bin/meshfilter
  • usr/lib/mrtrix3/bin/mrinfo
  • usr/lib/mrtrix3/bin/mrview
  • usr/lib/mrtrix3/bin/tck2fixel
  • usr/lib/mrtrix3/bin/tckedit
  • usr/lib/mrtrix3/bin/tckgen
  • usr/lib/mrtrix3/bin/tckglobal
  • usr/lib/mrtrix3/bin/tcksift
  • usr/lib/mrtrix3/bin/tcksift2
  • usr/lib/mrtrix3/bin/voxel2fixel
  • usr/lib/mrtrix3/bin/voxel2mesh
  • usr/lib/mrtrix3/bin/warp2metric
  • usr/lib/mrtrix3/lib/libmrtrix.so
• P image-file-in-usr-lib
  • usr/lib/mrtrix3/icons/desktop/128x128/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/16x16/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/32x32/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/48x48/mrtrix.png
  • usr/lib/mrtrix3/icons/desktop/64x64/mrtrix.png
  • usr/lib/mrtrix3/icons/mrtrix.png
• P script-uses-unversioned-python-in-shebang
  • usr/lib/mrtrix3/bin/5ttgen
  • usr/lib/mrtrix3/bin/average_response
  • usr/lib/mrtrix3/bin/blend
  • usr/lib/mrtrix3/bin/convert_bruker
  • usr/lib/mrtrix3/bin/dwi2response
  • usr/lib/mrtrix3/bin/dwibiascorrect
  • usr/lib/mrtrix3/bin/dwigradcheck
  • usr/lib/mrtrix3/bin/dwiintensitynorm
  • usr/lib/mrtrix3/bin/dwipreproc
  • usr/lib/mrtrix3/bin/labelsgmfix
  • usr/lib/mrtrix3/bin/population_template
• I spelling-error-in-binary
  • usr/lib/mrtrix3/bin/label2mesh suppport support
  • usr/lib/mrtrix3/bin/mesh2voxel suppport support
  • usr/lib/mrtrix3/bin/meshconvert suppport support
  • usr/lib/mrtrix3/bin/meshfilter suppport support
  • usr/lib/mrtrix3/bin/mrcalc exising existing
  • usr/lib/mrtrix3/bin/mredit instad instead
  • usr/lib/mrtrix3/bin/mrregister tranformed transformed
  • usr/lib/mrtrix3/bin/mrview mappping mapping
  • usr/lib/mrtrix3/bin/mrview suppport support
  • usr/lib/mrtrix3/bin/mtnormalise accomodate accommodate
  • usr/lib/mrtrix3/bin/tckconvert Broser Browser
  • usr/lib/mrtrix3/bin/tckmap mappping mapping
  • usr/lib/mrtrix3/bin/tcksift performace performance
  • usr/lib/mrtrix3/bin/tcksift2 performace performance
  • usr/lib/mrtrix3/bin/transformcompose seperately separately
  • usr/lib/mrtrix3/bin/transformconvert "allows to" "allows one to"
  • usr/lib/mrtrix3/bin/voxel2mesh suppport support

mrtrix3-doc

• I possible-documentation-but-no-doc-base-registration

• X debian-watch-does-not-check-gpg-signature
• I debian-watch-uses-insecure-uri
  • http://pypi.debian.net/pynwb/pynwb-(.+)\.(?:zip|tgz|tbz|txz|(?:tar\.(?:gz|bz2|xz)))
• I out-of-date-standards-version
  • 4.2.1 (released 2018-08-25) (current is 4.4.1)
• P package-uses-old-debhelper-compat-version
  • 9
• P rules-requires-root-missing
• I testsuite-autopkgtest-missing
• I unused-file-paragraph-in-dep5-copyright
  • paragraph at line 10
• X upstream-metadata-file-is-missing
• I wildcard-matches-nothing-in-dep5-copyright
  • debian (paragraph at line 10)